LOCUS VTR93256.1 157 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Uncultured bacterium genome assembly
Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=
1: GyrI-like protein.
ACCESSION LR593886-2557
PROTEIN_ID VTR93256.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_44580"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KMU7|A0A090KMU7_9BACT ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=9e-69 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A059WUP2|A0A059WUP2_9BACT ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=GyrI-like small
molecule binding domain protein OS=uncultured bacterium
PE=4 SV=1 ; EVALUE=3e-29 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W7TBU5|W7TBU5_9PSEU ;
ALN/Q_length_ratio=0.879 ; DESCRIPTION=Uncharacterized
protein OS=Kutzneria sp. 744 GN=KUTG_08688 PE=4 SV=1 ;
EVALUE=3e-20 ; Q/S_length_ratio=1.098"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|W0RPT9|W0RPT9_9BACT ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Transcription
activator effector binding protein OS=Gemmatimonadetes
bacterium KBS708 GN=J421_4820 PE=4 SV=1 ; EVALUE=5e-18 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A024K8K4|A0A024K8K4_9RHIZ ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Uncharacterized
protein OS=Devosia sp. DDB001 PE=4 SV=1 ; EVALUE=3e-17 ;
Q/S_length_ratio=0.924"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A087LVT3|A0A087LVT3_9RHIZ ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Uncharacterized
protein OS=Devosia sp. 17-2-E-8 GN=JP74_02345 PE=4 SV=1 ;
EVALUE=3e-17 ; Q/S_length_ratio=0.924"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F4CYR2|F4CYR2_PSEUX ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Transcription
activator effector binding protein OS=Pseudonocardia
dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 /
CB1190) GN=Psed_4477 PE=4 SV=1 ; EVALUE=8e-17 ;
Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q0AX83|Q0AX83_SYNWW ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Uncharacterized
protein OS=Syntrophomonas wolfei subsp. wolfei (strain DSM
2245B / Goettingen) GN=Swol_1364 PE=4 SV=1 ; EVALUE=3e-13
; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q0YSF2|Q0YSF2_9CHLB ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=Transcription
activator, effector binding OS=Chlorobium ferrooxidans DSM
13031 GN=CferDRAFT_1254 PE=4 SV=1 ; EVALUE=8e-13 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|E3IZ92|E3IZ92_FRASU ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Transcription
activator effector binding protein OS=Frankia sp. (strain
EuI1c) GN=FraEuI1c_3510 PE=4 SV=1 ; EVALUE=1e-12 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C8X6Z7|C8X6Z7_NAKMY ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=Transcriptional
activator ligand binding domain protein OS=Nakamurella
multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /
Y-104) GN=Namu_4616 PE=4 SV=1 ; EVALUE=2e-12 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W9GC53|W9GC53_9MICO ;
ALN/Q_length_ratio=0.809 ; DESCRIPTION=AraC family
transcriptional regulator OS=Intrasporangium oryzae NRRL
B-24470 GN=N865_09325 PE=4 SV=1 ; EVALUE=3e-11 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K4MDK3|K4MDK3_9EURY ;
ALN/Q_length_ratio=0.834 ; DESCRIPTION=Uncharacterized
protein OS=Methanolobus psychrophilus R15 GN=Mpsy_1849
PE=4 SV=1 ; EVALUE=5e-11 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q12Q57|Q12Q57_SHEDO ;
ALN/Q_length_ratio=0.752 ; DESCRIPTION=Transcription
activator, effector binding OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=Sden_1132
PE=4 SV=1 ; EVALUE=7e-11 ; Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F6DLS1|F6DLS1_DESRL ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Transcription
activator effector binding protein OS=Desulfotomaculum
ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL)
GN=Desru_0063 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=1.026"
/note="Pfam_scan:hit_1 (5..147);
Pfam:PF06445.10:GyrI-like;
Pfam_type:Domain;HMM_aln_Length:71; HMM_Length:155;
EVALUE:1.7e-05; BITSCORE: 24.9"
BEGIN
1 MEHVVRLEQV SSQLLAVVRR RAGVRELSKI VPEACGIVWN VVRAQRVAGA GRHVAVYLDD
61 QINLEVGVEV STPFAGHGEV IGSATPPGLT ATTTHYGPYQ RLHEAHEAIR QWCASNGYRP
121 AGPNWEMYGH WKDEWNNDPT QIVTDVFYLL VADGSSS
//