LOCUS VTR93156.1 510 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana trna-splicing ligase : RNA-splicing
ligase RtcB OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=Plim_2495 PE=3 SV=1:
RtcB protein.
ACCESSION LR593886-2457
PROTEIN_ID VTR93156.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_45580"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SPU6|D5SPU6_PLAL2 ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=Planctomyces limnophilus (strain ATCC 43296 / DSM
3776 / IFAM 1008 / 290) GN=Plim_2495 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|C0Z9V8|C0Z9V8_BREBN ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=BBR47_58350 PE=3 SV=1 ; EVALUE=1e-163 ;
Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|J2H1H4|J2H1H4_9BACL ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=Brevibacillus sp. BC25 GN=PMI05_01917 PE=3 SV=1 ;
EVALUE=1e-161 ; Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|R9JQU5|R9JQU5_9FIRM ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=Lachnospiraceae bacterium A4 GN=C804_02119 PE=3
SV=1 ; EVALUE=1e-155 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|N9WYH8|N9WYH8_9FIRM ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=[Clostridium] hathewayi 12489931
GN=HMPREF1093_04294 PE=3 SV=1 ; EVALUE=1e-152 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R0C5F3|R0C5F3_9FIRM ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=[Clostridium] bolteae 90A5 GN=HMPREF1095_02038
PE=3 SV=1 ; EVALUE=1e-148 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|R0AKD8|R0AKD8_9FIRM ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=[Clostridium] bolteae 90B8 GN=HMPREF1097_04981
PE=3 SV=1 ; EVALUE=1e-148 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A8RTV8|A8RTV8_CLOBW ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=Clostridium bolteae (strain ATCC BAA-613 / WAL
16351) GN=CLOBOL_03807 PE=3 SV=1 ; EVALUE=1e-148 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|R0DLV0|R0DLV0_9FIRM ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=[Clostridium] bolteae 90B7 GN=HMPREF1096_02543
PE=3 SV=1 ; EVALUE=1e-148 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|R0AZZ9|R0AZZ9_9FIRM ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=[Clostridium] bolteae 90B3 GN=HMPREF1089_02335
PE=3 SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|N9YFT9|N9YFT9_9FIRM ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=[Clostridium] clostridioforme 90A7
GN=HMPREF1082_04302 PE=3 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|R5TBV8|R5TBV8_9CLOT ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=Clostridium hathewayi CAG:224 GN=BN544_03202 PE=3
SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R5F402|R5F402_9CLOT ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=Clostridium bolteae CAG:59 GN=BN723_04273 PE=3
SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|R0C5N2|R0C5N2_9FIRM ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA-splicing ligase
RtcB OS=[Clostridium] bolteae 90A9 GN=HMPREF1085_01155
PE=3 SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D3ARE2|D3ARE2_9FIRM ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=RNA-splicing ligase
RtcB (Fragment) OS=[Clostridium] hathewayi DSM 13479
GN=CLOSTHATH_06198 PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=0.893"
/note="Pfam_scan:hit_1 (27..510); Pfam:PF01139.12:RtcB;
Pfam_type:Family;HMM_aln_Length:414; HMM_Length:420;
EVALUE:9.8e-96; BITSCORE: 321.2"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0016874"
/note="Enzyme_Code:EC:6.5.1"
BEGIN
1 MPIDPRLTRL DENRVRVNNP HNVDTTLFAN EQVPVESAAV TELIELLALQ ENVQQVAEAA
61 PDSFDQAPEI VRVAVTPDFH KARGIPVGTV LATRGFVVPQ AIGSDINCGM RLHTTTLKSD
121 DISANLDGLE TAFRHLYFEG GRNIPMTRSQ RHAMFTGGLE AVLDATANLH EGLWPLVREL
181 GAEDQLDRIE RRGSLPAGRV FGLSDFMGTD DRLSRDGQIG SIGGGNHFVE IQRVEKVLDG
241 TVAHAWGLKP GTVTIMIHTG SVGVGHLCGG HYRDVVRKIH PEKLKHPANG VFVLPEGARH
301 REHAETFWDA LHNAANFAYA NRMFLAVMAV AGMREVFGDR VGCDLVYDAP HNFVWKDEVD
361 GEEVVLHRKG ATPARGFEAM AGTPFAHYGE PVLVPGSMGA SSFVLVGQGN AESMASASHG
421 AGRTLSRGEA MRGFDEEFRK FMEEFRVVTP TDLRRADVRQ RPDILGKKLE EIKQEAPFAY
481 KGIGPVVNTL TGAGIARPVV ELTPLMTIKG
//