LOCUS VTR93145.1 299 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana family transcriptional regulator :
DNA-binding domain-containing protein, AraC-type OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5492 PE=4 SV=1: AraC_N: HTH_18 protein.
ACCESSION LR593886-2446
PROTEIN_ID VTR93145.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_45690"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DLT7|L0DLT7_SINAD ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=DNA-binding
domain-containing protein, AraC-type OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5492 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|H8MXS1|H8MXS1_CORCM ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=AraC family
transcriptional regulator OS=Corallococcus coralloides
(strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) GN=yqhC
PE=4 SV=1 ; EVALUE=1e-107 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A085W6V2|A0A085W6V2_9DELT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Transcriptional
regulator, AraC family protein OS=Hyalangium minutum
GN=DB31_2533 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A085XGV4|A0A085XGV4_9DELT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Transcriptional
regulator, AraC family protein OS=Enhygromyxa salina
GN=DB30_2369 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F8CH51|F8CH51_MYXFH ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=AraC-like
transcriptional regulator OS=Myxococcus fulvus (strain
ATCC BAA-855 / HW-1) GN=LILAB_15325 PE=4 SV=1 ;
EVALUE=1e-104 ; Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A5G9Q0|A5G9Q0_GEOUR ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Geobacter uraniireducens (strain
Rf4) GN=Gura_4375 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|S4Y559|S4Y559_SORCE ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_28340
PE=4 SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=0.934"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|S6AK38|S6AK38_PSERE ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Putative AraC
family transcriptional regulator OS=Pseudomonas
resinovorans NBRC 106553 GN=PCA10_31930 PE=4 SV=1 ;
EVALUE=1e-103 ; Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|U2SNX2|U2SNX2_9DELT ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Myxococcus sp. (contaminant ex
DSM 436) GN=A176_05774 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=0.890"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|U3HK86|U3HK86_PSEAC ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas alcaligenes OT 69 GN=L682_06100
PE=4 SV=1 ; EVALUE=1e-102 ; Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B3E2X9|B3E2X9_GEOLS ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=Glov_3538 PE=4 SV=1 ;
EVALUE=1e-102 ; Q/S_length_ratio=0.952"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q3A5L7|Q3A5L7_PELCD ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=Helix-turn-helix
transcriptional regulator, AraC family OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=Pcar_1091
PE=4 SV=1 ; EVALUE=1e-102 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L8MFE0|L8MFE0_PSEPS ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Pseudomonas pseudoalcaligenes
KF707 GN=ppKF707_1363 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q747Y8|Q747Y8_GEOSL ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Helix-turn-helix
transcriptional regulator, AraC family OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=GSU3127 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M4S1S0|M4S1S0_9SPHN ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=AraC-like
transcriptional regulator OS=Sphingomonas sp. MM-1
GN=G432_09980 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.993"
/note="Pfam_scan:hit_1 (25..177); Pfam:PF06719.8:AraC_N;
Pfam_type:Family;HMM_aln_Length:154; HMM_Length:155;
EVALUE:5.3e-52; BITSCORE: 175.2"
/note="Pfam_scan:hit_2 (210..286); Pfam:PF12833.2:HTH_18;
Pfam_type:Domain;HMM_aln_Length:75; HMM_Length:81;
EVALUE:2.2e-20; BITSCORE: 72.5"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MGDQRLKDLG AAIDRQTRTD GVHPTVVPEL TLYRFSAPTQ PTAVLYEPSL CLIAQGSKVV
61 HLADELYRYD PAQFLLVSVD LPVTGKIIEG SPELPYLALR IGLDAGVVGE LVADGAAPES
121 RAPDRGLAVS PVEAPLLDAV ARLVDLLEQP RDVTALAPLV LREITYRILT GEQGTRLRQI
181 TAVGGPAQRI ARAIRWLKDH FAEPLSIDAL AREVRMSASA LHHHFKRVTA LSPLQYQKRL
241 RLQEARRLML GEGLDAASAA FRVGYESPSQ FSREYRRLFG APPKADVVSL QQEPVPLRV
//