LOCUS VTR93051.1 954 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Hemolysin-type calcium-binding region
domain protein OS=Rhodopirellula maiorica SM1 GN=RMSM_03614
PE=4 SV=1: VCBS: VCBS protein.
ACCESSION LR593886-2352
PROTEIN_ID VTR93051.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_46630"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5RJJ3|M5RJJ3_9PLAN ;
ALN/Q_length_ratio=0.374 ; DESCRIPTION=Hemolysin-type
calcium-binding region domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_03614 PE=4 SV=1 ; EVALUE=1e-40 ;
Q/S_length_ratio=0.390"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G2IPZ2|G2IPZ2_9SPHN ;
ALN/Q_length_ratio=0.370 ; DESCRIPTION=Conserved
hypothetical membrane protein OS=Sphingobium sp. SYK-6
GN=SLG_11450 PE=4 SV=1 ; EVALUE=4e-07 ;
Q/S_length_ratio=0.169"
/note="Pfam_scan:hit_1 (708..769); Pfam:PF13517.1:VCBS;
Pfam_type:Repeat;HMM_aln_Length:60; HMM_Length:61;
EVALUE:7.6e-09; BITSCORE: 35.8"
/note="Pfam_scan:hit_2 (807..868); Pfam:PF13517.1:VCBS;
Pfam_type:Repeat;HMM_aln_Length:60; HMM_Length:61;
EVALUE:3e-07; BITSCORE: 30.7"
BEGIN
1 MNRSPTWIRD VWGRLFTAPP RAFRRRALLQ VTALEDRTTP ATFVQSGSNL DLDLNTGSTG
61 LTVASAGATY TLTLSVGTWT SSNITGATGS GTNVLTVTAD TFAALNLTDS ATGCTVNFSG
121 TGNTYTDDFN VTLNDSPGAV FFTGTTTAFG AANLSINTVN AVVLNGTGVA LTSSTGNITL
181 TANVQATPTS GNLDGIGVSG GASIQITGSG ALTLQGRGGD DSTGAQLGVA VFNGGQVIGG
241 TGAVTITGTG GASAGIQNFG VYIDGLSQIT SAGGNVSVTG AGGGTGASSQ NAGLFIGGGS
301 QLSAGGAGTV SVTGTGGAAS GAGNHGVSVG SAAITSSGGA VTVTGTAGAT GAGIQVAGTG
361 AITTATNGGD LTLTTDAINL ITGATVAASA ADAVILRPLT PGLGIDLGGA GGGNPLVLTD
421 ALLDTITAGT IRIGGTGTGA VTITAPITRS APTNVVLTGS SVTGAVAGTD LDLNGRTLSF
481 GTGTALASTI TGTTPDTGYD QLSVTGSVNL SGVGVSLAGP FVPTVGAVFN LVSATVTVSG
541 SFGPALTTLN SVTLQTGATA TTGFVAFPVP VTIGLPPQTM QVGGAPVAVN LSAFFTAPAT
601 PVVYTVVGNT SPVTAAANVG GSLLTLTGLA AGTTNITVRL TDANGQFVDS TFTFTVTGAT
661 TATPTKLLVS GAGGSGGRIS IYNADGSVKV TLTPFAGFAG SVVTANGDVN NDGTPDVIVG
721 TAAGPAHVKV FDGATGTELF SFLAFGGYLG GTRVASGDVN NDGVDDIIVG SATGASHVKV
781 FDGTTGATIR SFFAFADNNG VTVGSGDING DGFDDIIVGA AAGSSLVRVF NGQNATQLLQ
841 FEAFAGFTGG INVAGGDLDG NGRSEVLVGA NVNGHVKAFG ADGGLRLSFL AYPNFRGAAR
901 VGSVDTNGDG KADIVTGVGP GAGPHVKRFD GQTLAELSSF FAFDPSFTGG IFVG
//