LOCUS VTR93009.1 339 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna polymerase iii subunit delta :
DNA polymerase III, delta subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_2977 PE=4 SV=1: DNA_pol3_delta protein.
ACCESSION LR593886-2310
PROTEIN_ID VTR93009.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_47050"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DF04|L0DF04_SINAD ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=DNA polymerase III,
delta subunit OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2977
PE=4 SV=1 ; EVALUE=9e-60 ; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|H5SBZ5|H5SBZ5_9BACT ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=DNA polymerase III
subunit delta OS=uncultured planctomycete
GN=HGMM_F07G10C09 PE=4 SV=1 ; EVALUE=5e-59 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R6F0|E8R6F0_ISOPI ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=DNA polymerase III,
delta subunit OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_1265 PE=4 SV=1 ; EVALUE=8e-50 ;
Q/S_length_ratio=0.887"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F0SGW7|F0SGW7_PLABD ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=DNA polymerase III,
delta subunit OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0778 PE=4 SV=1 ; EVALUE=1e-47 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5SVP4|D5SVP4_PLAL2 ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=DNA polymerase III,
delta subunit OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_3591 PE=4 SV=1
; EVALUE=1e-43 ; Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6BZJ4|A6BZJ4_9PLAN ;
ALN/Q_length_ratio=0.891 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_21448
PE=4 SV=1 ; EVALUE=7e-43 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3ZUA9|A3ZUA9_9PLAN ;
ALN/Q_length_ratio=1.041 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_21769 PE=4 SV=1 ; EVALUE=1e-36 ;
Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2QWI3|D2QWI3_PIRSD ;
ALN/Q_length_ratio=1.050 ; DESCRIPTION=DNA polymerase III,
delta subunit OS=Pirellula staleyi (strain ATCC 27377 /
DSM 6068 / ICPB 4128) GN=Psta_3122 PE=4 SV=1 ;
EVALUE=5e-36 ; Q/S_length_ratio=0.916"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I3IMA2|I3IMA2_9PLAN ;
ALN/Q_length_ratio=0.699 ; DESCRIPTION=DNA polymerase III
delta subunit OS=planctomycete KSU-1 GN=KSU1_C1251 PE=4
SV=1 ; EVALUE=4e-33 ; Q/S_length_ratio=1.043"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|X0S310|X0S310_9ZZZZ ;
ALN/Q_length_ratio=0.599 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L05987 (Fragment) OS=marine
sediment metagenome GN=S01H1_14974 PE=4 SV=1 ;
EVALUE=1e-32 ; Q/S_length_ratio=1.461"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|X1NWB6|X1NWB6_9ZZZZ ;
ALN/Q_length_ratio=0.711 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S06H3_S02290 (Fragment) OS=marine
sediment metagenome GN=S06H3_28772 PE=4 SV=1 ;
EVALUE=4e-31 ; Q/S_length_ratio=1.340"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|R7JYX2|R7JYX2_9CLOT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=DNA polymerase III
delta subunit OS=Clostridium sp. CAG:277 GN=BN584_00218
PE=4 SV=1 ; EVALUE=1e-28 ; Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R6VA98|R6VA98_9FIRM ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=DNA polymerase III
delta subunit OS=Roseburia sp. CAG:380 GN=BN635_01582 PE=4
SV=1 ; EVALUE=6e-28 ; Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A084HDH1|A0A084HDH1_9BACI ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=DNA polymerase III
subunit delta OS=Bacillus sp. SJS GN=AS29_03835 PE=4 SV=1
; EVALUE=3e-25 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A6CQY6|A6CQY6_9BACI ;
ALN/Q_length_ratio=0.746 ; DESCRIPTION=Uncharacterized
protein OS=Bacillus sp. SG-1 GN=BSG1_17475 PE=4 SV=1 ;
EVALUE=2e-24 ; Q/S_length_ratio=0.969"
/note="Pfam_scan:hit_1 (18..184);
Pfam:PF06144.8:DNA_pol3_delta;
Pfam_type:Family;HMM_aln_Length:170; HMM_Length:172;
EVALUE:1.3e-19; BITSCORE: 70.3"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0005622"
/note="Enzyme_Code:EC:2.7.7.7"
BEGIN
1 MDALQFLATK DSKRQSVYAL VGDEDFLKRH ARERIISVVL GEEDPSFAVS VYAGDKLDFS
61 TARNELETLP FLAPCRVVIV ENADKFVTDN RPALEAYCAK PSRVGVLILD VKTFPETTKL
121 AKALPDAAKI GCKALPIYKL SAWCVEWAKT AHKKKLAAGA ADLLVELVGT SMGLLDQEIG
181 KLANAVGSKP GIAAEDVDAL VGRSKAADVF RIMDAVGEGR PGEALSILQE LFGEGEDPMA
241 VIGPLTAQLR KLATVGRLHL VEKMALGPAM DAANVPKWDK ARISFDKQLK HLGGRRLLKL
301 PDWLVEINHG LKGGNALPER VQVERLVVTL ARPLVPAKA
//