LOCUS VTR92998.1 774 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1:
HAMP: PAS_9: MCPsignal protein.
ACCESSION LR593886-2299
PROTEIN_ID VTR92998.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_47160"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.656 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-156 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.580 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=1.294"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.584 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.488"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.651 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-146 ; Q/S_length_ratio=0.851"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G0A6T8|G0A6T8_METMM ;
ALN/Q_length_ratio=0.592 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylomonas methanica (strain MC09) GN=Metme_2154 PE=4
SV=1 ; EVALUE=1e-143 ; Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Y0KHL8|Y0KHL8_9PROT ;
ALN/Q_length_ratio=0.609 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylophilaceae bacterium 11 GN=Meth11DRAFT_1510 PE=4
SV=1 ; EVALUE=1e-143 ; Q/S_length_ratio=0.896"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A5EDT7|A5EDT7_BRASB ;
ALN/Q_length_ratio=0.616 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=BBta_2145 PE=4 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D7HGU4|D7HGU4_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae RC385
GN=VCRC385_00092 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=1.337"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A4YP70|A4YP70_BRASO ;
ALN/Q_length_ratio=0.554 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. (strain ORS278)
GN=BRADO1824 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085PQ25|A0A085PQ25_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DN41_2401 PE=4 SV=1 ; EVALUE=1e-140
; Q/S_length_ratio=1.175"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C2IXB5|C2IXB5_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae TMA 21 GN=VCB_003522
PE=4 SV=1 ; EVALUE=1e-140 ; Q/S_length_ratio=1.175"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A3EJV9|A3EJV9_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae V51 GN=VCV51_0075
PE=4 SV=1 ; EVALUE=1e-139 ; Q/S_length_ratio=1.175"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A085PEP8|A0A085PEP8_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DA89_2479 PE=4 SV=1 ; EVALUE=1e-139
; Q/S_length_ratio=1.439"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A6A5F2|A6A5F2_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae MZO-2 GN=A5A_0096
PE=4 SV=1 ; EVALUE=1e-139 ; Q/S_length_ratio=1.175"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A085QL18|A0A085QL18_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DN33_2255 PE=4 SV=1 ; EVALUE=1e-139
; Q/S_length_ratio=1.175"
/note="Pfam_scan:hit_1 (6..188); Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:180; HMM_Length:181;
EVALUE:1.2e-27; BITSCORE: 96.4"
/note="Pfam_scan:hit_2 (195..264); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:65; HMM_Length:70;
EVALUE:4.5e-12; BITSCORE: 45.9"
/note="Pfam_scan:hit_3 (296..400); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:101; HMM_Length:104;
EVALUE:7.2e-15; BITSCORE: 55.2"
/note="Pfam_scan:hit_4 (514..715);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:5.6e-64; BITSCORE: 215.5"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MTKFNNLGIG TRLIGGFLVL AVACAAVGLW GIRSMTQINH SLENANGNLL PSLRAVTDLR
61 SGLSAVQRAE RSMLMAAGNK DEASRSQAAG AQDAAWAKAR EAQKRYEAFP MIDKEKKIWA
121 EYTPRLEEFR RDHESTMAAL KSGDIEKAEK LCFASGPNAT KVSALLNELC DLQGEIAERE
181 SKEAKEQFES SKTTMYAVIG GAVIVAIGLG IFFRNLIVNP LNTTVKVLQA VASGDLTQKA
241 AVTSTDEFGQ MGTALNATVT GIHTALQQDK VNWEAVGKQR AENADYMGQI AAIDRAQAVI
301 EFKLDGTIVR ANENFLRTMG YSLPEIQGRN HSMFIEPAYG SSPEYRDFWS RLNRGEYVAS
361 EFKRIGKGGK EVWIQGSYNP ILDLNGKPYK VVKFATDITA TKNMEQKIKE DAVELQQKVA
421 AIMTSVSALA AGDFTQEAPN LGTDEVGQMA AALNKAVVSV RTALEGVREV SEQLADASGQ
481 LSSASDEIST GAQEQASSLE ETASTLEEIT ATVRQNADSA QQARQLASSS RDVAEKGGQV
541 VGNAVEAMSE INQSSKKIAD IITTIDEIAF QTNLLALNAA VEAARAGEQG RGFAVVASEV
601 RNLAQRSATS AKEIKSLIED SVKKVDAGTE LVNQSGSTLG EIVTSVKRVT DIITEIAAAG
661 KEQSVGIEQV NKAVSQMDAV TQKNASQTEE MSATAQTLTD QAAQLRDLVA RFKLSEEGRS
721 VSRPASRSAR AKAPPTKPRP AVARAMSNGH SNGNGRGHEL DRLGGNGDDG FTEF
//