LOCUS VTR92980.1 1311 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pas domain-containing protein : PAS
domain S-box OS=Methanobacterium sp. Maddingley MBC34
GN=B655_1763 PE=4 SV=1: MASE1: PAS_3: PAS_4: PAS_8: PAS_4:
PAS_4: PAS_9: HisKA_2: HATPase_c protein.
ACCESSION LR593886-2281
PROTEIN_ID VTR92980.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_47340"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|K6TY25|K6TY25_9EURY ;
ALN/Q_length_ratio=0.463 ; DESCRIPTION=PAS domain S-box
OS=Methanobacterium sp. Maddingley MBC34 GN=B655_1763 PE=4
SV=1 ; EVALUE=1e-111 ; Q/S_length_ratio=1.319"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F4Y097|F4Y097_9CYAN ;
ALN/Q_length_ratio=0.256 ; DESCRIPTION=Histidine kinase
OS=Moorea producens 3L GN=LYNGBM3L_60890 PE=4 SV=1 ;
EVALUE=1e-101 ; Q/S_length_ratio=2.256"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q2JL10|Q2JL10_SYNJB ;
ALN/Q_length_ratio=0.453 ; DESCRIPTION=Sensory box
histidine kinase OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=CYB_1653 PE=4 SV=1 ; EVALUE=1e-97 ;
Q/S_length_ratio=1.283"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K9QJY1|K9QJY1_9NOSO ;
ALN/Q_length_ratio=0.262 ; DESCRIPTION=Signal transduction
histidine kinase OS=Nostoc sp. PCC 7107 GN=Nos7107_4602
PE=4 SV=1 ; EVALUE=2e-97 ; Q/S_length_ratio=2.171"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q2JQY6|Q2JQY6_SYNJA ;
ALN/Q_length_ratio=0.453 ; DESCRIPTION=Sensory box
histidine kinase OS=Synechococcus sp. (strain JA-3-3Ab)
GN=CYA_2886 PE=4 SV=1 ; EVALUE=1e-96 ;
Q/S_length_ratio=1.283"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K9WMN1|K9WMN1_9CYAN ;
ALN/Q_length_ratio=0.268 ; DESCRIPTION=PAS domain S-box
OS=Microcoleus sp. PCC 7113 GN=Mic7113_5146 PE=4 SV=1 ;
EVALUE=9e-95 ; Q/S_length_ratio=1.516"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9QR87|K9QR87_NOSS7 ;
ALN/Q_length_ratio=0.588 ; DESCRIPTION=PAS domain S-box
OS=Nostoc sp. (strain ATCC 29411 / PCC 7524)
GN=Nos7524_2045 PE=4 SV=1 ; EVALUE=2e-88 ;
Q/S_length_ratio=0.860"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|V4PHS8|V4PHS8_9CAUL ;
ALN/Q_length_ratio=0.457 ; DESCRIPTION=Histidine kinase
OS=Asticcacaulis sp. AC460 GN=ABAC460_18860 PE=4 SV=1 ;
EVALUE=1e-83 ; Q/S_length_ratio=0.930"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F4QS56|F4QS56_9CAUL ;
ALN/Q_length_ratio=0.465 ; DESCRIPTION=Histidine kinase
OS=Asticcacaulis biprosthecum C19 GN=ABI_39930 PE=4 SV=1 ;
EVALUE=2e-83 ; Q/S_length_ratio=0.930"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D1JEZ1|D1JEZ1_9ARCH ;
ALN/Q_length_ratio=0.349 ; DESCRIPTION=Putative sensor
histidine kinase OS=uncultured archaeon GN=BSM_05760 PE=4
SV=1 ; EVALUE=2e-82 ; Q/S_length_ratio=1.860"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K2R109|K2R109_METFO ;
ALN/Q_length_ratio=0.442 ; DESCRIPTION=Signal transduction
histidine kinase OS=Methanobacterium formicicum DSM 3637
GN=A994_11702 PE=4 SV=1 ; EVALUE=5e-81 ;
Q/S_length_ratio=1.595"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K9WL46|K9WL46_9CYAN ;
ALN/Q_length_ratio=0.579 ; DESCRIPTION=PAS domain S-box
OS=Microcoleus sp. PCC 7113 GN=Mic7113_4836 PE=4 SV=1 ;
EVALUE=6e-81 ; Q/S_length_ratio=1.428"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A090I891|A0A090I891_METFO ;
ALN/Q_length_ratio=0.443 ; DESCRIPTION=Putative membrane
protein OS=Methanobacterium formicicum GN=DSM1535_2183
PE=4 SV=1 ; EVALUE=9e-81 ; Q/S_length_ratio=1.593"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A089ZGN6|A0A089ZGN6_METFO ;
ALN/Q_length_ratio=0.443 ; DESCRIPTION=Histidine
kinase/PAS domain-containing protein OS=Methanobacterium
formicicum GN=BRM9_1491 PE=4 SV=1 ; EVALUE=4e-80 ;
Q/S_length_ratio=1.593"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K9SFR3|K9SFR3_9CYAN ;
ALN/Q_length_ratio=0.378 ; DESCRIPTION=Signal transduction
histidine kinase OS=Pseudanabaena sp. PCC 7367
GN=Pse7367_0481 PE=4 SV=1 ; EVALUE=1e-79 ;
Q/S_length_ratio=1.366"
/note="Pfam_scan:hit_1 (13..303); Pfam:PF05231.9:MASE1;
Pfam_type:Domain;HMM_aln_Length:295; HMM_Length:299;
EVALUE:8.5e-50; BITSCORE: 169.4"
/note="Pfam_scan:hit_2 (336..421); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:87; HMM_Length:91;
EVALUE:1.2e-11; BITSCORE: 44.5"
/note="Pfam_scan:hit_3 (445..554); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:110;
EVALUE:7.2e-16; BITSCORE: 58.1"
/note="Pfam_scan:hit_4 (596..659); Pfam:PF13188.1:PAS_8;
Pfam_type:Domain;HMM_aln_Length:30; HMM_Length:64;
EVALUE:0.0028; BITSCORE: 17.4"
/note="Pfam_scan:hit_5 (734..847); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:105; HMM_Length:110;
EVALUE:1.4e-12; BITSCORE: 47.6"
/note="Pfam_scan:hit_6 (863..972); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:106; HMM_Length:110;
EVALUE:1.5e-15; BITSCORE: 57.1"
/note="Pfam_scan:hit_7 (992..1096); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:103; HMM_Length:104;
EVALUE:1.8e-13; BITSCORE: 50.7"
/note="Pfam_scan:hit_8 (1117..1192);
Pfam:PF07568.7:HisKA_2;
Pfam_type:Domain;HMM_aln_Length:75; HMM_Length:76;
EVALUE:8.2e-30; BITSCORE: 102.4"
/note="Pfam_scan:hit_9 (1214..1310);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:102; HMM_Length:111;
EVALUE:7.8e-10; BITSCORE: 38.4"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MESQLSRWRP WAVVLGLALA YIVTARLGFT LGLPPDRKVT AIWPPSGIAF AALLIFGLRV
61 WPGIWLGSFL ANVWDAFDPA HSGTFVAHVG ASAVIATGST LQALAGAGLV RRFIGPGYPL
121 DRVRNVFRFV AVVPVVCLIA ATLGVTALCA SGLVPWGAFG TLWWTWWLGD AVGVLVVAPV
181 LLAWVRPLAP GAPRPTDAET VCLFALLLGA CVLVFGGWRA GVSASPLAYL SLPLLVWAAV
241 RFGSRGSALT VVVIAAFAIW GTVSGSGPFV RADVYESLLL LDIFLAVAVV TALVPCAVLQ
301 EREDVERALR ASEAKLRQLT EAVPQIVWMS EPDGSLAYLN RQWHEYTGLT GIGPTDLARV
361 VHPDDLKRLR DAGAEAHKLG TVFQHEFRMR PVHGGEYRWF LARSVPVVGP DGAPAGRIGT
421 STDIDDLKHA QSEMVRQQAD LQLILDTVPA LIFHKDRDHR LVRVNNELVR LVGLPREALQ
481 GRTDAGIGSP HAEQYRLDDE AIMTEAREVR GAIEPLYTIT GTRWLQTSKL PYRDATGRVT
541 GLIGFSVDVT EQKLAQDEVR RLNAELEQRV AERTAVAEAR TAELQRAVEA LREQKQLLQT
601 VLDSLGEAVL VVDKNGRFLM QNRAFRQLHP EPTENLSPIE RARVNGVYLA DGSGPCPPDQ
661 LPIFRAMRGE SCDNVELMTV SNAHPDGVPI SVTGRPILGP SGVEGGVIAI RNVSETRAVA
721 SALRESEKRF RAIFDQTFQF IGLMAADGTL LEANRTALAA AGLSEAEVLG KPFWDTPWWT
781 HDPVQRDRLQ DAVARANRGE TVRFVTTHRA ASGELLWVDF SLKPFHNENG VVTLLIPEGR
841 DITAIKRSAD ALEAADTLLR QFIKHAPAAI AMLDTEMRYV QASDRWLTDY HLTGQNVIGR
901 SHYEVFPDIP ERWKQAHRRV LAGAVEMCSE DPFPRADGGM EWLQWEARPW RKARGEIGGL
961 VFYTQVITDR IRAADALRES EERFRSAFDS APIGVALVSP DGRWLKVNQS VCALVGYSEA
1021 ELLTIDFQTI THPDDLGADL ALVEQVLRGE LPSYQMEKRY FHKTGHVIDV LLSVSLVRDA
1081 RGQPLYFISQ IQDITERKRA EVRLLASVHE KEVMLKEIHH RVKNNLQIIS TLLDLQSDGI
1141 TDPAALAAFR ESRGRVRSMA LIHERLYRSE NLASVEFGTY VRNLAEDLFR AYRADDEAIR
1201 LAVSVSVPPV PLDIAIPCGL LVNELISNCL KYAFADREGG MIAVSLAPEE PGTHLLTVAD
1261 DGVGLPPGFD FRHTTSFGLQ LVNTLVEQLG GDIALDGTSG TRFTIRFPAR G
//