LOCUS VTR92960.1 472 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana response regulator with -like aaa-type
and dna-binding domains : Response regulator with CheY-
like receiver, AAA-type ATPase, and DNA-binding domains
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_1278 PE=4 SV=1: Response_reg:
Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-2261
PROTEIN_ID VTR92960.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_47540"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D8V2|L0D8V2_SINAD ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1278 PE=4 SV=1
; EVALUE=1e-171 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5RVU1|M5RVU1_9PLAN ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula maiorica SM1 GN=RMSM_03548 PE=4 SV=1 ;
EVALUE=1e-159 ; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D954|L0D954_SINAD ;
ALN/Q_length_ratio=1.004 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0782 PE=4 SV=1
; EVALUE=1e-159 ; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F0SK36|F0SK36_PLABD ;
ALN/Q_length_ratio=1.019 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_2160 PE=4
SV=1 ; EVALUE=1e-151 ; Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6CBD4|A6CBD4_9PLAN ;
ALN/Q_length_ratio=1.017 ; DESCRIPTION=Nitrogen
assimilation regulatory protein OS=Planctomyces maris DSM
8797 GN=PM8797T_15566 PE=4 SV=1 ; EVALUE=1e-151 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZS60|A3ZS60_9PLAN ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Nitrogen
assimilation regulatory protein OS=Blastopirellula marina
DSM 3645 GN=DSM3645_14270 PE=4 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L0DPR2|L0DPR2_SINAD ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7189 PE=4 SV=1
; EVALUE=1e-149 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5T5I6|M5T5I6_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula sp. SWK7 GN=RRSWK_06777 PE=4 SV=1 ;
EVALUE=1e-146 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q7UE04|Q7UE04_RHOBA ;
ALN/Q_length_ratio=1.008 ; DESCRIPTION=Cetoacetate
metabolism regulatory protein atoC OS=Rhodopirellula
baltica (strain SH1) GN=atoC PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7CDR0|L7CDR0_RHOBT ;
ALN/Q_length_ratio=1.008 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SWK14 GN=RBSWK_03668 PE=4 SV=1 ;
EVALUE=1e-135 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5D560|K5D560_RHOBT ;
ALN/Q_length_ratio=1.008 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula baltica SH28 GN=RBSH_02880 PE=4 SV=1 ;
EVALUE=1e-135 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2B0C5|F2B0C5_RHOBT ;
ALN/Q_length_ratio=1.008 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Rhodopirellula baltica WH47
GN=RBWH47_00006 PE=4 SV=1 ; EVALUE=1e-135 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2B150|M2B150_9PLAN ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Rhodopirellula europaea 6C GN=RE6C_00636
PE=4 SV=1 ; EVALUE=1e-135 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0LFZ0|A0LFZ0_SYNFM ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
GN=Sfum_0643 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D8F2W4|D8F2W4_9DELT ;
ALN/Q_length_ratio=0.998 ; DESCRIPTION=Putative Nitrogen
assimilation regulatory protein OS=delta proteobacterium
NaphS2 GN=NPH_2543 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=0.983"
/note="Pfam_scan:hit_1 (4..114);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:112;
EVALUE:1e-21; BITSCORE: 76.9"
/note="Pfam_scan:hit_2 (138..305);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:5.7e-69; BITSCORE: 230.8"
/note="Pfam_scan:hit_3 (421..461); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:37; HMM_Length:42;
EVALUE:1.4e-09; BITSCORE: 37.3"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MPTLLVVDDE PSVCYSIARL FGDETTRVVT AGTVAEGIRA FRSERPEVVV LDLLLPDGTG
61 LQAFEAIRAI SPKQPVVFIT AHGTTTTAIE AMKQGAFDYL IKPLDFTRVA NILRRAFEAA
121 HLMQVSPVVP VLEPREQLVG RAPVIQEVCK QIGRVAPQDV NVLILGESGT GKELVARAVY
181 HHSKRSDKPF LAINCAALPE SLIESELFGH ERGAFTGADR ARIGKFEQCQ DGTIFLDEIG
241 DMPLAAQAKV LRLLQDQTFE RVGGRESIRT HVRVIAATNQ NLEKRIAAGL FRADLFYRLQ
301 GVTIALPALR DRPEDIAELA HHFLFLFNQE LGLNVQGFDP AALDCLRAHR WPGNIRELQA
361 VLKETMLRAT GAILLPEFLP PALRGQSIVR ATAPATSGEM DVSKLIEDLV ARGENDLHAR
421 VVTAVERILF DRVLHATNGH LGKAAERLGL NRSTLRYKLR DTGLSAESPH AE
//