LOCUS VTR92945.1 435 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana RND family efflux transporter, MFP
subunit OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0166 PE=
4 SV=1: HlyD_3 protein.
ACCESSION LR593886-2246
PROTEIN_ID VTR92945.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_47690"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D7K1|L0D7K1_SINAD ;
ALN/Q_length_ratio=0.837 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_0166 PE=4 SV=1 ; EVALUE=4e-82 ;
Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A3ZX58|A3ZX58_9PLAN ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=Possible membrane
fusion protein MtrC OS=Blastopirellula marina DSM 3645
GN=DSM3645_27703 PE=4 SV=1 ; EVALUE=2e-65 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|U2U874|U2U874_9DELT ;
ALN/Q_length_ratio=0.805 ; DESCRIPTION=Uncharacterized
protein OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_03208 PE=4 SV=1 ; EVALUE=3e-58 ;
Q/S_length_ratio=1.110"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A076I0Q3|A0A076I0Q3_9BACT ;
ALN/Q_length_ratio=0.848 ; DESCRIPTION=Uncharacterized
protein OS=Hymenobacter sp. APR13 GN=N008_21690 PE=4 SV=1
; EVALUE=1e-57 ; Q/S_length_ratio=1.064"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C1ABP7|C1ABP7_GEMAT ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=Secretion protein
HlyD family protein OS=Gemmatimonas aurantiaca (strain
T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=GAU_2882
PE=4 SV=1 ; EVALUE=5e-56 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A017SY85|A0A017SY85_9DELT ;
ALN/Q_length_ratio=0.830 ; DESCRIPTION=Uncharacterized
protein OS=Chondromyces apiculatus DSM 436 GN=CAP_7567
PE=4 SV=1 ; EVALUE=1e-44 ; Q/S_length_ratio=1.082"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A0A6QY70|A0A0A6QY70_9GAMM ;
ALN/Q_length_ratio=0.717 ; DESCRIPTION=Membrane fusion
protein MtrC OS=Methylomonas sp. FJG1 GN=JT25_19290 PE=4
SV=1 ; EVALUE=1e-35 ; Q/S_length_ratio=1.310"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W1S7Z5|W1S7Z5_9SPHN ;
ALN/Q_length_ratio=0.664 ; DESCRIPTION=Membrane fusion
protein MtrC OS=Sphingobium sp. C100 GN=C100_02760 PE=4
SV=1 ; EVALUE=6e-32 ; Q/S_length_ratio=1.314"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A013VNJ7|A0A013VNJ7_9SPHN ;
ALN/Q_length_ratio=0.667 ; DESCRIPTION=Membrane fusion
protein MtrC OS=Sphingobium sp. Ant17 GN=BF95_00870 PE=4
SV=1 ; EVALUE=5e-31 ; Q/S_length_ratio=1.314"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q82WK4|Q82WK4_NITEU ;
ALN/Q_length_ratio=0.722 ; DESCRIPTION=Possible membrane
fusion protein MtrC OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=NE0670 PE=4 SV=1 ; EVALUE=7e-27 ;
Q/S_length_ratio=1.310"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A085K4N3|A0A085K4N3_SPHYA ;
ALN/Q_length_ratio=0.538 ; DESCRIPTION=Membrane fusion
protein MtrC OS=Sphingobium yanoikuyae GN=IH86_13665 PE=4
SV=1 ; EVALUE=5e-25 ; Q/S_length_ratio=1.318"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A084E4Y5|A0A084E4Y5_SPHYA ;
ALN/Q_length_ratio=0.538 ; DESCRIPTION=Membrane fusion
protein MtrC OS=Sphingobium yanoikuyae GN=CP98_05009 PE=4
SV=1 ; EVALUE=7e-25 ; Q/S_length_ratio=1.385"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|J8VX31|J8VX31_9SPHN ;
ALN/Q_length_ratio=0.683 ; DESCRIPTION=Membrane fusion
protein MtrC OS=Sphingomonas sp. LH128 GN=LH128_12978 PE=4
SV=1 ; EVALUE=8e-23 ; Q/S_length_ratio=1.334"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A031JCE6|A0A031JCE6_9SPHN ;
ALN/Q_length_ratio=0.715 ; DESCRIPTION=Membrane fusion
protein MtrC OS=Novosphingobium resinovorum GN=BV97_05354
PE=4 SV=1 ; EVALUE=1e-22 ; Q/S_length_ratio=1.272"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E0TIK4|E0TIK4_PARBH ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Secretion protein
HlyD OS=Parvularcula bermudensis (strain ATCC BAA-594 /
HTCC2503 / KCTC 12087) GN=PB2503_00475 PE=4 SV=1 ;
EVALUE=4e-22 ; Q/S_length_ratio=1.142"
/note="Pfam_scan:hit_1 (224..289); Pfam:PF13437.1:HlyD_3;
Pfam_type:Family;HMM_aln_Length:52; HMM_Length:105;
EVALUE:2e-07; BITSCORE: 31.3"
BEGIN
1 MTYRHGLLTG ITSTALAAGA IGAAWWVVAA PIKEPTKSAA PGIPATVPKP FKEDQAATVV
61 LTADAEAKLA LRTAPVTRAS VPRARVFGGE VVVPPGRSIL VSAPLAGTLK AGTAPVPGQL
121 VRAGKPVLQL VPVLDPVGRA NLTAARVDAD GQVKTADEQL KLARITLGRA KEVLAEGGGR
181 QRDVDDANAA LKVAEQTHAA ATARRDLLGK VLGELDSGTA APIPIDAPAD GVLRNVNSLP
241 GQMVPAGAPL FEVINLDAVW VRVPVYVGDR EEIDGAFATI RPLAAPTGSS GRGAWAVGAP
301 PTANPLAGTV DLFFHTLNPD PSDDRWKAVA GAVGGFAVAP FAGAPLGPGQ RVAVMLALKE
361 PAEALIVPWA AVLYDFHGGT WVYVKTADRT YSRERVRVRH VTGERAVLDD GPAPGKEVVS
421 AGAAELFGTE TGFSK
//