LOCUS VTR92912.1 626 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana fis family transcriptional regulator
: Formate hydrogenlyase transcriptional activator OS=Methyloglobulus
morosus KoM1 GN=fhlA PE=4 SV=1: GAF: PAS_9: Sigma54_activat:
HTH_8 protein.
ACCESSION LR593886-2213
PROTEIN_ID VTR92912.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_48020"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|W6LXG6|W6LXG6_9GAMM ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Putative
DNA-binding protein Fis / transcriptional regulator, Fis
family OS=Candidatus Contendobacter odensis Run_B_J11
GN=BN874_2790008 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F9ZYT8|F9ZYT8_METMM ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Putative PAS/PAC
sensor protein OS=Methylomonas methanica (strain MC09)
GN=Metme_0185 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W6M0N9|W6M0N9_9GAMM ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Putative
DNA-binding protein Fis / transcriptional regulator, Fis
family OS=Candidatus Contendobacter odensis Run_B_J11
GN=BN874_1740019 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B4DAQ1|B4DAQ1_9BACT ;
ALN/Q_length_ratio=0.767 ; DESCRIPTION=Transcriptional
regulator, NifA subfamily, Fis Family OS=Chthoniobacter
flavus Ellin428 GN=CfE428DRAFT_5992 PE=4 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=0.634"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|V5E1W7|V5E1W7_9GAMM ;
ALN/Q_length_ratio=1.002 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Methyloglobulus
morosus KoM1 GN=fhlA PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|W6M9X8|W6M9X8_9GAMM ;
ALN/Q_length_ratio=1.005 ; DESCRIPTION=Putative
DNA-binding protein Fis / transcriptional regulator, Fis
family OS=Candidatus Competibacter denitrificans Run_A_D11
GN=BN873_490073 PE=4 SV=1 ; EVALUE=1e-176 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q2IK42|Q2IK42_ANADE ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=DNA-binding protein
Fis / transcriptional regulator, Fis family
OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=Adeh_2253 PE=4 SV=1 ; EVALUE=1e-159 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A7HI74|A7HI74_ANADF ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=Anae109_4242 PE=4 SV=1 ;
EVALUE=1e-155 ; Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|W4L980|W4L980_9DELT ;
ALN/Q_length_ratio=0.569 ; DESCRIPTION=Transcriptional
regulator OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_34810 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.245"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W4L8U8|W4L8U8_9DELT ;
ALN/Q_length_ratio=0.530 ; DESCRIPTION=Transcriptional
regulator OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_34860 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.358"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W4L9Z1|W4L9Z1_9DELT ;
ALN/Q_length_ratio=0.535 ; DESCRIPTION=Uncharacterized
protein (Fragment) OS=Candidatus Entotheonella sp. TSY2
GN=ETSY2_49675 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|W6MAB6|W6MAB6_9GAMM ;
ALN/Q_length_ratio=0.748 ; DESCRIPTION=PAS modulated
sigma54 specific transcriptional regulator, Fis family
OS=Candidatus Competibacter denitrificans Run_A_D11
GN=BN873_350106 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|W4LK71|W4LK71_9DELT ;
ALN/Q_length_ratio=0.527 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_19060 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.227"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|W4LT23|W4LT23_9DELT ;
ALN/Q_length_ratio=0.604 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_08600 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.186"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H8GPT6|H8GPT6_METAL ;
ALN/Q_length_ratio=0.796 ; DESCRIPTION=PAS domain S-box
OS=Methylomicrobium album BG8 GN=Metal_1949 PE=4 SV=1 ;
EVALUE=1e-133 ; Q/S_length_ratio=1.036"
/note="Pfam_scan:hit_1 (27..160); Pfam:PF01590.21:GAF;
Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:154;
EVALUE:2.2e-05; BITSCORE: 24.6"
/note="Pfam_scan:hit_2 (184..286); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:96; HMM_Length:104;
EVALUE:1.1e-06; BITSCORE: 28.9"
/note="Pfam_scan:hit_3 (317..484);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:3.2e-72; BITSCORE: 241.4"
/note="Pfam_scan:hit_4 (576..620); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42;
EVALUE:8.6e-08; BITSCORE: 31.5"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MPNPVPPADR EEVAALRAIV EGTVRHTGEE FFRALVRNLS AATAVPSAFV AEFAGSNTRV
61 RTLAYWSDGA FLANTEWELA GTPCEDVLKG NFCHHPTGVS AKFPGDAGAA DTESYLGVPL
121 RDAAGQVLGH LCVYDARPMP AEPRLLYTFQ IFAARAAAEL ERLRMDRMLR DSEARFRDLF
181 DEAPIAYVHE DLDSRFLRAN RAALRMLGLK PEEAVGTLGR SLVADTVDMR TKVTAAFGEL
241 ERGAEPGAVV IELRRRDDGR PVWVRWWSKP DPGGQFTRTV MMDITEQVLA ERERARLQHQ
301 NAYLQDEIKS AHNFDEIVGS SPALVSVLQR VSKVAGTDST VLVTGETGTG KELVARAVHS
361 ASPRRGKPLI KLNCAALPAA LVESELFGHE KGAFTGATSR KPGRFELADG GTLFLDEVGE
421 LSLEAQAKLL RVLQEREFER VGGTAPVRVD VRVIAATNRD LAKRVRDGQF REDLFYRLNV
481 FPVRLPALRE RGGDVPLLVR FFVAKFAARL GKRFEGIGAS TLDALAAYHW PGNIRELENV
541 IERAVILSDG PELEIDPEVL PTTPDGAVPT VPGENSLVAV ERAHVLEVLA RTGWVIEGAS
601 GAAKVLGLHP NTLRSRMKKL GITRPT
//