LOCUS VTR92910.1 250 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana short-chain dehydrogenase reductase
sdr : Short-chain dehydrogenase/reductase SDR OS=Pirellula
staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=
Psta_1052 PE=4 SV=1: adh_short protein.
ACCESSION LR593886-2211
PROTEIN_ID VTR92910.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_48040"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2R8B8|D2R8B8_PIRSD ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1052 PE=4 SV=1
; EVALUE=6e-96 ; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A3ZTX9|A3ZTX9_9PLAN ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=Pteridine reductase
1-possibly short-chain dehydrogenase OS=Blastopirellula
marina DSM 3645 GN=DSM3645_05425 PE=3 SV=1 ; EVALUE=5e-95
; Q/S_length_ratio=0.933"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5S318|M5S318_9PLAN ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula maiorica SM1
GN=RMSM_01040 PE=4 SV=1 ; EVALUE=2e-81 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5UCK1|M5UCK1_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula sallentina
SM41 GN=RSSM_02952 PE=4 SV=1 ; EVALUE=2e-79 ;
Q/S_length_ratio=0.853"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K5DAD7|K5DAD7_RHOBT ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula baltica SH28
GN=RBSH_04837 PE=4 SV=1 ; EVALUE=4e-74 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CIH1|L7CIH1_RHOBT ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula baltica
SWK14 GN=RBSWK_02170 PE=4 SV=1 ; EVALUE=4e-73 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q7UF85|Q7UF85_RHOBA ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Pteridine reductase
1-possibly short-chain dehydrogenase OS=Rhodopirellula
baltica (strain SH1) GN=RB10272 PE=4 SV=1 ; EVALUE=5e-73 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F2ARN4|F2ARN4_RHOBT ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula baltica WH47
GN=RBWH47_00522 PE=4 SV=1 ; EVALUE=5e-73 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5T4V0|M5T4V0_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula sp. SWK7
GN=RRSWK_03334 PE=4 SV=1 ; EVALUE=9e-73 ;
Q/S_length_ratio=0.919"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2AZP1|M2AZP1_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula europaea 6C
GN=RE6C_03803 PE=4 SV=1 ; EVALUE=1e-70 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5S8A7|M5S8A7_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Rhodopirellula europaea
SH398 GN=RESH_01700 PE=4 SV=1 ; EVALUE=7e-70 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F0SPT1|F0SPT1_PLABD ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_1428 PE=4 SV=1 ; EVALUE=1e-67 ;
Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H1XU83|H1XU83_9BACT ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Caldithrix abyssi DSM 13497
GN=Calab_1959 PE=3 SV=1 ; EVALUE=3e-52 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A059X3N3|A0A059X3N3_9BACT ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=Short chain
dehydrogenase OS=uncultured bacterium PE=3 SV=1 ;
EVALUE=1e-51 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D5MM57|D5MM57_9BACT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Short-chain
dehydrogenase/reductase SDR OS=Candidatus Methylomirabilis
oxyfera GN=DAMO_0882 PE=3 SV=1 ; EVALUE=2e-50 ;
Q/S_length_ratio=1.025"
/note="Pfam_scan:hit_1 (5..175);
Pfam:PF00106.20:adh_short;
Pfam_type:Domain;HMM_aln_Length:164; HMM_Length:167;
EVALUE:8.2e-24; BITSCORE: 84.3"
/note="GO_domain:GO:0016491"
BEGIN
1 MQPKRVALVT GSGAKRVGSV VAGALARRGY AIAVHYRTSA AEASDTVAAL RSAGGEAAAF
61 PADLTDERAV RAMVRDVLGH FGRIDALVNC AAVWKPKPLE EVTAADVRFH FDTNALGTFL
121 TCQQVGLAMA QQPEGGAIVN IGDWAEVRPY PGYAAYFPSK GAVTATTRCL AVELALRNPR
181 VRVNAILPGP VMLPPDLPEA EKQQAINATL VKREGSPSNI AQAVLSFLDN DFVTGACLPV
241 DGGRTVYAPE
//