LOCUS VTR92886.1 568 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana conjugal transfer coupling protein
: Type IV secretory pathway, VirD4 component OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_7665 PE=4 SV=1: T4SS-DNA_transf protein.
ACCESSION LR593886-2187
PROTEIN_ID VTR92886.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_48280"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DQH2|L0DQH2_SINAD ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Type IV secretory
pathway, VirD4 component OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7665 PE=4 SV=1 ; EVALUE=6e-84 ;
Q/S_length_ratio=0.906"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I4I7K0|I4I7K0_9CHRO ;
ALN/Q_length_ratio=0.806 ; DESCRIPTION=Putative conjugal
transfer protein OS=Microcystis sp. T1-4 GN=MICAI_1010004
PE=4 SV=1 ; EVALUE=4e-59 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|R0FH32|R0FH32_9XANT ;
ALN/Q_length_ratio=0.715 ; DESCRIPTION=Uncharacterized
protein OS=Xanthomonas fragariae LMG 25863 GN=O1K_04406
PE=4 SV=1 ; EVALUE=3e-58 ; Q/S_length_ratio=1.297"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|V3BWP3|V3BWP3_KLEPN ;
ALN/Q_length_ratio=0.757 ; DESCRIPTION=Uncharacterized
protein OS=Klebsiella pneumoniae BIDMC 22 GN=L458_05116
PE=4 SV=1 ; EVALUE=4e-58 ; Q/S_length_ratio=0.700"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A096Y6P5|A0A096Y6P5_AERSA ;
ALN/Q_length_ratio=0.783 ; DESCRIPTION=Conjugative protein
OS=Aeromonas salmonicida subsp. salmonicida GN=traG PE=4
SV=1 ; EVALUE=2e-54 ; Q/S_length_ratio=0.679"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A5JHK4|A5JHK4_9GAMM ;
ALN/Q_length_ratio=0.783 ; DESCRIPTION=Conjugative protein
OS=Aeromonas bestiarum GN=traG PE=4 SV=1 ; EVALUE=2e-54 ;
Q/S_length_ratio=0.679"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|U1E3X3|U1E3X3_PSEAI ;
ALN/Q_length_ratio=0.790 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas aeruginosa HB13 GN=PA13_1028755
PE=4 SV=1 ; EVALUE=1e-50 ; Q/S_length_ratio=0.753"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W1RR03|W1RR03_9SPHN ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=Conjugal transfer
protein TraG OS=Sphingobium sp. C100 GN=C100_20530 PE=4
SV=1 ; EVALUE=7e-50 ; Q/S_length_ratio=1.088"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U6QS27|U6QS27_SALET ;
ALN/Q_length_ratio=0.806 ; DESCRIPTION=Uncharacterized
protein OS=Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. 08-1739 GN=SE451239_09035 PE=4 SV=1 ;
EVALUE=1e-49 ; Q/S_length_ratio=0.687"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M1RSX5|M1RSX5_PSEAI ;
ALN/Q_length_ratio=0.699 ; DESCRIPTION=TraG OS=Pseudomonas
aeruginosa GN=traG PE=4 SV=1 ; EVALUE=2e-49 ;
Q/S_length_ratio=0.676"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|T2K1A4|T2K1A4_ACHDE ;
ALN/Q_length_ratio=0.699 ; DESCRIPTION=Conjugal transfer
protein TraG OS=Achromobacter denitrificans GN=traG PE=4
SV=1 ; EVALUE=2e-49 ; Q/S_length_ratio=0.676"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|J0CF87|J0CF87_RHILT ;
ALN/Q_length_ratio=0.829 ; DESCRIPTION=Type IV secretory
pathway, VirD4 component OS=Rhizobium leguminosarum bv.
trifolii WSM2012 GN=Rleg10DRAFT_6665 PE=4 SV=1 ;
EVALUE=8e-49 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H1XMU7|H1XMU7_9XANT ;
ALN/Q_length_ratio=0.790 ; DESCRIPTION=TraG/TraD family
protein OS=Xanthomonas axonopodis pv. punicae str. LMG 859
GN=traG PE=4 SV=1 ; EVALUE=1e-48 ; Q/S_length_ratio=0.686"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M3ASD4|M3ASD4_PSEAI ;
ALN/Q_length_ratio=0.835 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas aeruginosa PA21_ST175 GN=H123_31863
PE=4 SV=1 ; EVALUE=5e-48 ; Q/S_length_ratio=0.683"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|J8VWT6|J8VWT6_9SPHN ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=Putative TraG
conjugal transfer transmembrane protein OS=Sphingomonas
sp. LH128 GN=LH128_16658 PE=4 SV=1 ; EVALUE=9e-48 ;
Q/S_length_ratio=1.088"
/note="Pfam_scan:hit_1 (91..526);
Pfam:PF02534.9:T4SS-DNA_transf;
Pfam_type:Family;HMM_aln_Length:400; HMM_Length:469;
EVALUE:5.3e-64; BITSCORE: 216.5"
/note="GO_domain:GO:0008150"
/note="GO_domain:GO:0005575"
BEGIN
1 MQLCRILLIL AVLLAVGAAI LAACQIPFVW LALAALLIAL AYRKGHQSVA HGSSRWATTR
61 ELAHMFEGPG LGVGEHTGTV SLSEGVGALF NSRLDNRASC QKFLQALQKD PKFLVRLTRA
121 VHVACFAPTG AGKGVSLIVP FLLSSRESCV VLDYKGENAF LTRAARARMR HHVVLLDPFR
181 VVTETPDCLN VLDFIDRDAP TALDHIRSLA EAIVVRSGHE KEPHWLDSAE TWITAITAVV
241 IACAADADRN LQSVRSILTN PAKIQLAIRV GCASDAWGGM LSRLCFQLTQ FQGEELASVL
301 TTTNRVMRYL DTLATAESST RSTFDPAWLL DRKMSVYLIV PPEHQRTQVP LLRLWLTTLM
361 KAVVRGGLQQ TTKVNFVLDE AASLGRMTVV DDALDKFRGY GIRLQLYYQS LGQLRSCYSD
421 GGDMTLLSNT SKIFFGVNDW ATAELVSNLL GDETIVTASG GTGSGSSHQT SPQGGTYGSS
481 TSANDNWSYL GRRLLTPSEV LNLPERVAIV LAPGLRPFWT WLIPHYLGSP ARAPGLTKSL
541 VHAVLLFLLA AALAVASTAA WFGFQFGR
//