LOCUS VTR92872.1 412 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana site-specific recombinase : Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1949
PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-2173
PROTEIN_ID VTR92872.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_48420"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DAA6|L0DAA6_SINAD ;
ALN/Q_length_ratio=1.073 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1949
PE=4 SV=1 ; EVALUE=3e-83 ; Q/S_length_ratio=0.932"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5U6L9|M5U6L9_9PLAN ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=Site-specific
recombinase, phage integrase family OS=Rhodopirellula
sallentina SM41 GN=RSSM_01443 PE=4 SV=1 ; EVALUE=4e-76 ;
Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|X0UKF9|X0UKF9_9ZZZZ ;
ALN/Q_length_ratio=0.187 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S10344 (Fragment) OS=marine
sediment metagenome GN=S01H1_39749 PE=4 SV=1 ;
EVALUE=1e-15 ; Q/S_length_ratio=4.120"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DBB3|L0DBB3_SINAD ;
ALN/Q_length_ratio=0.379 ; DESCRIPTION=Uncharacterized
protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2213 PE=4 SV=1
; EVALUE=6e-14 ; Q/S_length_ratio=1.943"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6G3M5|A6G3M5_9DELT ;
ALN/Q_length_ratio=0.432 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_21429 PE=4 SV=1 ;
EVALUE=2e-11 ; Q/S_length_ratio=1.141"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|T0KLJ9|T0KLJ9_9SPHN ;
ALN/Q_length_ratio=0.362 ; DESCRIPTION=Uncharacterized
protein OS=Sphingobium ummariense RL-3 GN=M529_00140 PE=4
SV=1 ; EVALUE=2e-11 ; Q/S_length_ratio=1.839"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L7U9N0|L7U9N0_MYXSD ;
ALN/Q_length_ratio=0.430 ; DESCRIPTION=Phage integrase
family site specific recombinase OS=Myxococcus stipitatus
(strain DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_03243 PE=4
SV=1 ; EVALUE=6e-11 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|I3IKC7|I3IKC7_9PLAN ;
ALN/Q_length_ratio=0.388 ; DESCRIPTION=Hypothetical phage
protein OS=planctomycete KSU-1 GN=KSU1_C0576 PE=4 SV=1 ;
EVALUE=2e-10 ; Q/S_length_ratio=1.181"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D8F1Z2|D8F1Z2_9DELT ;
ALN/Q_length_ratio=0.767 ; DESCRIPTION=Site-specific
recombinase, phage integrase family OS=delta
proteobacterium NaphS2 GN=NPH_1518 PE=4 SV=1 ;
EVALUE=6e-09 ; Q/S_length_ratio=0.934"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|U3B3X2|U3B3X2_9VIBR ;
ALN/Q_length_ratio=0.364 ; DESCRIPTION=Putative integrase
OS=Vibrio ezurae NBRC 102218 GN=VEZ01S_38_00140 PE=4 SV=1
; EVALUE=8e-09 ; Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|U2SHC9|U2SHC9_9DELT ;
ALN/Q_length_ratio=0.614 ; DESCRIPTION=Integrase
OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_00835
PE=4 SV=1 ; EVALUE=9e-09 ; Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q096J0|Q096J0_STIAD ;
ALN/Q_length_ratio=0.430 ; DESCRIPTION=Phage integrase
family protein OS=Stigmatella aurantiaca (strain DW4/3-1)
GN=STAUR_0920 PE=4 SV=1 ; EVALUE=1e-08 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q2IFG9|Q2IFG9_ANADE ;
ALN/Q_length_ratio=0.422 ; DESCRIPTION=Phage integrase
OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=Adeh_3561 PE=4 SV=1 ; EVALUE=4e-08 ;
Q/S_length_ratio=1.498"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A010YUZ4|A0A010YUZ4_9BACT ;
ALN/Q_length_ratio=0.580 ; DESCRIPTION=Site-specific
recombinase XerD OS=Cloacibacillus evryensis DSM 19522
GN=Cloev_1138 PE=4 SV=1 ; EVALUE=5e-08 ;
Q/S_length_ratio=1.067"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|G9PU92|G9PU92_9BACT ;
ALN/Q_length_ratio=0.580 ; DESCRIPTION=Uncharacterized
protein OS=Synergistes sp. 3_1_syn1 GN=HMPREF1006_02727
PE=4 SV=1 ; EVALUE=5e-08 ; Q/S_length_ratio=1.067"
/note="Pfam_scan:hit_1 (227..399);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:168; HMM_Length:173;
EVALUE:2.9e-23; BITSCORE: 82.3"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MAWLETKGNV FRIRFRYGGT KHLLTLHTSD KKEADESLAC FGANLRLIER GIIDPPPAAA
61 EIGRYIISGG KLARRPSETA RSERATLGIL FDRYLTSFPR AAKEASTWKT ETIHIGHLRR
121 LLDVRLPLAD VSQKTIQEYI DARTQETGLR KKRISRETVR KELGTFSAIW NKWGVPQGLV
181 SGPPPVTNLT FPKGSAKAPF QTREQIERQI ARHKLSLNAQ AELWHGLFLT LPEVEELLDH
241 VRAAGRPAYV YPMMMFAAHT GARRSEIRRS LVNDFDFVGK TVMIREKKKD HDKIETYRTV
301 PLSPRLETAM REWFQKHGGG MHTICTPSGR AITDHYATKI MLGAVRRSKW SVISGWHCLR
361 HSFISNCAAR GVDQRLIDHW VGHTTEAMRR RYSHLLPAVS QAALFSVFGI RS
//