LOCUS VTR92769.1 1050 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana wd-40 repeat protein : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: WD40: WD40: WD40
protein.
ACCESSION LR593886-2070
PROTEIN_ID VTR92769.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_49450"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
ALN/Q_length_ratio=1.070 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=7e-85 ;
Q/S_length_ratio=0.906"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|X0KUP7|X0KUP7_FUSOX ;
ALN/Q_length_ratio=0.565 ; DESCRIPTION=Uncharacterized
protein OS=Fusarium oxysporum f. sp. vasinfectum 25433
GN=FOTG_18972 PE=4 SV=1 ; EVALUE=3e-59 ;
Q/S_length_ratio=1.177"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K9V395|K9V395_9CYAN ;
ALN/Q_length_ratio=0.570 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_2739 PE=4 SV=1 ; EVALUE=6e-59 ;
Q/S_length_ratio=0.658"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B8LXS9|B8LXS9_TALSN ;
ALN/Q_length_ratio=0.508 ; DESCRIPTION=G-protein beta
WD-40 repeats containing protein, putative OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=TSTA_062310 PE=4 SV=1 ; EVALUE=8e-55 ;
Q/S_length_ratio=0.652"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0YMI4|A0YMI4_LYNSP ;
ALN/Q_length_ratio=0.514 ; DESCRIPTION=WD-40 repeat
protein OS=Lyngbya sp. (strain PCC 8106) GN=L8106_17667
PE=4 SV=1 ; EVALUE=4e-54 ; Q/S_length_ratio=0.768"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E0UJ20|E0UJ20_CYAP2 ;
ALN/Q_length_ratio=0.554 ; DESCRIPTION=WD40 repeat,
subgroup OS=Cyanothece sp. (strain PCC 7822)
GN=Cyan7822_2631 PE=4 SV=1 ; EVALUE=4e-54 ;
Q/S_length_ratio=0.827"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9UX17|K9UX17_9CYAN ;
ALN/Q_length_ratio=0.508 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_1366 PE=4 SV=1 ; EVALUE=2e-53 ;
Q/S_length_ratio=1.667"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A061AE54|A0A061AE54_9ACTO ;
ALN/Q_length_ratio=0.551 ; DESCRIPTION=Transcriptional
regulator, XRE family OS=Streptomyces iranensis GN=SIRAN60
PE=4 SV=1 ; EVALUE=8e-53 ; Q/S_length_ratio=0.850"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0EB01|A0EB01_PARTE ;
ALN/Q_length_ratio=0.552 ; DESCRIPTION=Chromosome
undetermined scaffold_87, whole genome shotgun sequence
OS=Paramecium tetraurelia GN=GSPATT00025202001 PE=4 SV=1 ;
EVALUE=2e-52 ; Q/S_length_ratio=1.429"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D7BXH8|D7BXH8_STRBB ;
ALN/Q_length_ratio=0.550 ; DESCRIPTION=Putative WD-40
repeat protein OS=Streptomyces bingchenggensis (strain
BCW-1) GN=SBI_04631 PE=4 SV=1 ; EVALUE=8e-52 ;
Q/S_length_ratio=0.811"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A0A1VVL1|A0A0A1VVL1_MICAE ;
ALN/Q_length_ratio=0.552 ; DESCRIPTION=High-affnity carbon
uptake protein Hat/HatR OS=Microcystis aeruginosa NIES-44
GN=N44_02003 PE=4 SV=1 ; EVALUE=9e-52 ;
Q/S_length_ratio=1.143"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C7RS72|C7RS72_ACCPU ;
ALN/Q_length_ratio=0.558 ; DESCRIPTION=WD-40 repeat
protein OS=Accumulibacter phosphatis (strain UW-1)
GN=CAP2UW1_2609 PE=4 SV=1 ; EVALUE=1e-51 ;
Q/S_length_ratio=0.604"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F4XK01|F4XK01_9CYAN ;
ALN/Q_length_ratio=0.552 ; DESCRIPTION=WD-40
repeat-containing protein OS=Moorea producens 3L
GN=LYNGBM3L_10820 PE=4 SV=1 ; EVALUE=2e-51 ;
Q/S_length_ratio=0.720"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q3MCV7|Q3MCV7_ANAVT ;
ALN/Q_length_ratio=0.544 ; DESCRIPTION=Ribosome assembly
protein 4 (RSA4) OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=Ava_1556 PE=4 SV=1 ; EVALUE=5e-51 ;
Q/S_length_ratio=0.636"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B2IXC4|B2IXC4_NOSP7 ;
ALN/Q_length_ratio=0.542 ; DESCRIPTION=WD-40 repeat
protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=Npun_F1222 PE=4 SV=1 ; EVALUE=1e-50 ;
Q/S_length_ratio=0.866"
/note="Pfam_scan:hit_1 (45..112);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71;
EVALUE:3.7e-08; BITSCORE: 32.8"
/note="Pfam_scan:hit_2 (136..189);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:46; HMM_Length:54;
EVALUE:2.5e-10; BITSCORE: 39.6"
/note="Pfam_scan:hit_3 (493..529); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:28; HMM_Length:39;
EVALUE:2.7e-06; BITSCORE: 27.0"
/note="Pfam_scan:hit_4 (861..883); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:39;
EVALUE:0.0031; BITSCORE: 17.3"
/note="Pfam_scan:hit_5 (887..925); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:34; HMM_Length:39;
EVALUE:8.9e-10; BITSCORE: 38.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MGRDVPRGLA HYIRDMAGLW RSDARTDREL LSAFVSGDGP AFAALVVRHG QTVWSACRRV
61 LGNDADTEDA FQATFIALAR NAGHVRSDSI SGWLQKVSHT VAVNARKAAR RRNTVERRLL
121 DRANRSDEQF PDEELRAVVG DEVACLPERL RVPLTLYYLE GKTQAEIGRI LGVTDRAAAH
181 RLKQALKLLR ERLARRGVTV AATALAAVLG HVPIVTAVPI ALVTQATEIA LAVAAGNSID
241 TAATRLALEA TRTHGWARLK LYSLVLVSVA CAMIGGALLA QRGEPPAESG PRGAPNAPLS
301 GDMNRTDWFG DQLPAGALAR LGTVRFRTGG GTGLSSVAFG PAGKMLISSH GEDTVHFWDL
361 ETGREVRKLR APRACWAVTT ALNGNRLVAA GIDEIWAWDL ADGAPRFLWK MQSKSVGFAN
421 VEFSPDGTLI AHGGDAAEQI NLLDAATGAV VRTLAGHGER FAFSADSKSL ASWKWWEFTE
481 VGVWDVATGA KQHTFVASSG KKGVSSAAFA PSGKWLATAG QDGELRVWDL DRGTERYHLA
541 SDADPNAFVG FGPHGSTLLE IGGGRVRSWD IDTGRTTRAI ACSVDNRWAN VHRLSADGTQ
601 VAVAWHSGVG AWDVTSGRAL GSAVEMPHES VHPVVFSRDG ATLVTSTLDV NGAAVQLWDA
661 DGRPRQRFAI PPGQLVWGCD FAADGSLSAL VGTVTQLPPD PPNRISRWDA RTGARLAEAR
721 LPAGVRCVAF APDGQHMAVA LAEGVALCNR ATGRVVRTLP GACTADALTF SADEGTLAAF
781 DATTGEITIW SLAGGRERKW PVSADPKVRA SLRRSLALSP DGRLLAIGTE DFKIGIRVMD
841 VATGTEVWAL AGQLHGWRQE FAFAPDGRTI AACGFDGAVR VWEVASGRKR YRFAGHRSGV
901 GAVTFSPDGR RLASASFDCT VLIWDVSTPQ QPVPTDRPTA AQLWDALTAP DAAAGHRALV
961 SLAATPETSV PLLRDRLCSD TRSTDLGDER DSKSPAHRAI VRGIEALERM GRDPAAKQLL
1021 GDLAKHPVES VSGREARRAL DRLAGSLKRD
//