LOCUS VTR92750.1 569 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase-recombinase protein : Uncultured
bacterium genome assembly Metasoil_fosmids_resub OS=uncultured
bacterium PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-2051
PROTEIN_ID VTR92750.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_49640"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KMF3|A0A090KMF3_9BACT ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.916"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5TSZ5|M5TSZ5_9PLAN ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_06380 PE=4 SV=1
; EVALUE=1e-103 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5TZQ5|M5TZQ5_9PLAN ;
ALN/Q_length_ratio=0.793 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_03803 PE=4 SV=1
; EVALUE=1e-101 ; Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q7UJ13|Q7UJ13_RHOBA ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=Probable
integrase-recombinase protein OS=Rhodopirellula baltica
(strain SH1) GN=RB12202 PE=4 SV=1 ; EVALUE=6e-96 ;
Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L7CAI7|L7CAI7_RHOBT ;
ALN/Q_length_ratio=0.931 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_05106 PE=4 SV=1 ;
EVALUE=4e-93 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5U9Y1|M5U9Y1_9PLAN ;
ALN/Q_length_ratio=0.801 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_00409 PE=4 SV=1
; EVALUE=1e-91 ; Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5R6X7|M5R6X7_9PLAN ;
ALN/Q_length_ratio=0.933 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_07826 PE=4 SV=1 ; EVALUE=3e-90 ;
Q/S_length_ratio=1.072"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|X0T3K4|X0T3K4_9ZZZZ ;
ALN/Q_length_ratio=0.494 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L08131 (Fragment) OS=marine
sediment metagenome GN=S01H1_18596 PE=4 SV=1 ;
EVALUE=4e-81 ; Q/S_length_ratio=1.751"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2AG18|M2AG18_9PLAN ;
ALN/Q_length_ratio=0.643 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein (Fragment)
OS=Rhodopirellula europaea 6C GN=RE6C_03211 PE=4 SV=1 ;
EVALUE=7e-70 ; Q/S_length_ratio=1.348"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|X0ZHI7|X0ZHI7_9ZZZZ ;
ALN/Q_length_ratio=0.446 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H4_L00480 OS=marine sediment
metagenome GN=S01H4_14198 PE=4 SV=1 ; EVALUE=2e-62 ;
Q/S_length_ratio=2.032"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2AQ41|M2AQ41_9PLAN ;
ALN/Q_length_ratio=0.286 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Rhodopirellula europaea 6C GN=RE6C_04415 PE=4 SV=1 ;
EVALUE=7e-31 ; Q/S_length_ratio=2.518"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B5JL57|B5JL57_9BACT ;
ALN/Q_length_ratio=0.647 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_705 PE=4
SV=1 ; EVALUE=4e-28 ; Q/S_length_ratio=1.329"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5SAG3|M5SAG3_9PLAN ;
ALN/Q_length_ratio=0.670 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula europaea SH398 GN=RESH_00956 PE=4 SV=1 ;
EVALUE=2e-26 ; Q/S_length_ratio=1.224"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0DJ84|L0DJ84_SINAD ;
ALN/Q_length_ratio=0.589 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4560
PE=4 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=1.470"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|X0SNN7|X0SNN7_9ZZZZ ;
ALN/Q_length_ratio=0.301 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L00378 OS=marine sediment
metagenome GN=S01H1_04139 PE=4 SV=1 ; EVALUE=8e-17 ;
Q/S_length_ratio=2.018"
/note="Pfam_scan:hit_1 (260..442);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:154; HMM_Length:173;
EVALUE:2.8e-14; BITSCORE: 53.1"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MGAVFKKQST RAVPVGAEIV VKGAERIARW RVRGKLRTAP LTKGTGGADR IVTESATYFA
61 KYRDATGKVV VRPTECRDKQ AAEQMLKKWE REGEQIKSGT LDRKALDAAR QAAVPLEEHL
121 AAYTRSLIAA EVSDTYRSNV LRAVRCVSKD CGFATPADFD REAVENWMAA RIEDGMSARS
181 RNYYRESLIA FANWCVGTGR LVGHDLNRVP KADQKSDPRR QRRSLTEDEL KRLLAVASVR
241 PLTDTQTIRR GNRKGQTAAD LKPETVARLQ ALGRERALIY KTLVLTGLRK NELATLTVGQ
301 LDLTAGSAFL QLDAADEKSR EGNAIAIRDD LADDLRNWLA DKLAAVQTVA REAGEPTPTL
361 LPGEALLFDV PSGLVRILDR DLVAAGIPKR DDRGRTVDVH AMRTTFGTLL SKTGTAPRTA
421 QAAMRHSDIK LTMGVYTDTR LLDVRGAVEK LPTLPLTGGA GATTGAITEP RTSDDFASAP
481 NSVAPEVAPT PFRGRLSGAT PGTEQPNNEP QNKVDGIDVS ADGVNEKPSV TTTVTEGHRV
541 GLIGFEPTTS WSRTKRSSQA ELQPVSSQL
//