LOCUS VTR92700.1 463 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana two sigma54 transcriptional fis family
: Two component, sigma54 specific, transcriptional regulator,
Fis family OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_3482 PE=4 SV=1: Response_reg:
Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-2001
PROTEIN_ID VTR92700.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_50140"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8QX00|E8QX00_ISOPI ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_3482 PE=4 SV=1 ; EVALUE=1e-175 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DDN5|L0DDN5_SINAD ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2631 PE=4 SV=1
; EVALUE=1e-172 ; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6CAC1|A6CAC1_9PLAN ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Probable response
regulatory protein (AtoC) OS=Planctomyces maris DSM 8797
GN=PM8797T_27130 PE=4 SV=1 ; EVALUE=1e-162 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SWX1|D5SWX1_PLAL2 ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=Sigma-54 factor
interaction domain-containing protein OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=Plim_1639 PE=4 SV=1 ; EVALUE=1e-162 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F0SH25|F0SH25_PLABD ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_1901 PE=4
SV=1 ; EVALUE=1e-160 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2R262|D2R262_PIRSD ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_4020 PE=4 SV=1 ; EVALUE=1e-159 ;
Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M2B3S1|M2B3S1_9PLAN ;
ALN/Q_length_ratio=1.015 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula europaea 6C GN=RE6C_02502 PE=4 SV=1 ;
EVALUE=1e-155 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5SB19|M5SB19_9PLAN ;
ALN/Q_length_ratio=1.015 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula europaea SH398 GN=RESH_04421 PE=4 SV=1 ;
EVALUE=1e-155 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F2B0B2|F2B0B2_RHOBT ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula baltica WH47 GN=RBWH47_02663 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7CNA1|L7CNA1_RHOBT ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SWK14 GN=RBSWK_00181 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q7UJ61|Q7UJ61_RHOBA ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Probable response
regulatory protein (AtoC) OS=Rhodopirellula baltica
(strain SH1) GN=RB12108 PE=4 SV=1 ; EVALUE=1e-153 ;
Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K5CG60|K5CG60_RHOBT ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula baltica SH28 GN=RBSH_01673 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A4A185|A4A185_9PLAN ;
ALN/Q_length_ratio=1.009 ; DESCRIPTION=Probable response
regulatory protein (AtoC) OS=Blastopirellula marina DSM
3645 GN=DSM3645_19982 PE=4 SV=1 ; EVALUE=1e-152 ;
Q/S_length_ratio=0.939"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5THM9|M5THM9_9PLAN ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula sp. SWK7 GN=RRSWK_04233 PE=4 SV=1 ;
EVALUE=1e-152 ; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5RX82|M5RX82_9PLAN ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula maiorica SM1 GN=RMSM_03051 PE=4 SV=1 ;
EVALUE=1e-151 ; Q/S_length_ratio=0.951"
/note="Pfam_scan:hit_1 (10..120);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:2.9e-22; BITSCORE: 78.7"
/note="Pfam_scan:hit_2 (145..312);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:3.4e-68; BITSCORE: 228.3"
/note="Pfam_scan:hit_3 (413..454); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42;
EVALUE:5.5e-14; BITSCORE: 51.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSAPAEPLQI LVIDDDKTHA ETVAESLERR GHACTIATGG KAGVAKLEQT PFDVVLTDLK
61 MADLHGLEVV ERCKQLRPDV DVYVITGFAE IETAVEAMKR GAAHYLRKPL NLAELRAVVE
121 NSAKRVGTLR DLRRQIDEKF GFEGVVGNSP NMQKVLKALR AYAPSSASVV ILGENGTGKE
181 LVARSLHTNS PRKAKPFTAM NCAALNENLL DDEMFGHEDG AYTGSKGARK GRFEHAHGGT
241 LFLDEIGDMP LALQAKLLRA LENGEIVRIG ANDPIKVDVR IIAATNKDLQ KEVDAGRFRQ
301 DLYFRLKVGT IKLPPLREHR EDVPQLVSHF LKDFARRDNK PVPKVSPGVW KAFEGYDWPG
361 NVRELRNLLD SMTVLDLDGE LTPDDFPDDA GVKPPGAGGT TASSGPDHLI GHPLDEVERY
421 YMEKALELTG GNREEAAKML KISERTMYRK LQEWKKESEK PAE
//