LOCUS VTR92682.1 1146 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana protein-export membrane protein secd
: Protein-export membrane protein SecD OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008
/ 290) GN=Plim_1349 PE=3 SV=1: SecD_SecF: SecD_SecF protein.
ACCESSION LR593886-1983
PROTEIN_ID VTR92682.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_50320"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SVB3|D5SVB3_PLAL2 ;
ALN/Q_length_ratio=0.704 ; DESCRIPTION=Protein-export
membrane protein SecD OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1349 PE=3
SV=1 ; EVALUE=1e-112 ; Q/S_length_ratio=1.149"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DM50|L0DM50_SINAD ;
ALN/Q_length_ratio=0.548 ; DESCRIPTION=Protein-export
membrane protein, SecD/SecF family OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5633 PE=3 SV=1 ; EVALUE=1e-108 ;
Q/S_length_ratio=1.116"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A3ZPY2|A3ZPY2_9PLAN ;
ALN/Q_length_ratio=0.491 ; DESCRIPTION=Protein-export
membrane protein secD OS=Blastopirellula marina DSM 3645
GN=DSM3645_22726 PE=3 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L7CRJ7|L7CRJ7_RHOBT ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=SecF protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_00416 PE=3 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K5DM05|K5DM05_RHOBT ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=SecF protein
OS=Rhodopirellula baltica SH28 GN=RBSH_00957 PE=3 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F2ATJ4|F2ATJ4_RHOBT ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=SecF protein
OS=Rhodopirellula baltica WH47 GN=RBWH47_05624 PE=3 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5SGM5|M5SGM5_9PLAN ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=SecF protein
OS=Rhodopirellula europaea SH398 GN=RESH_04054 PE=3 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7US98|Q7US98_RHOBA ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=Protein-export
membrane protein secD OS=Rhodopirellula baltica (strain
SH1) GN=secD PE=3 SV=1 ; EVALUE=1e-99 ;
Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2B166|M2B166_9PLAN ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=SecF protein
OS=Rhodopirellula europaea 6C GN=RE6C_03780 PE=3 SV=1 ;
EVALUE=2e-99 ; Q/S_length_ratio=1.044"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A6CC71|A6CC71_9PLAN ;
ALN/Q_length_ratio=0.318 ; DESCRIPTION=Protein-export
membrane protein secD OS=Planctomyces maris DSM 8797
GN=PM8797T_31765 PE=3 SV=1 ; EVALUE=3e-95 ;
Q/S_length_ratio=1.156"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5RH73|M5RH73_9PLAN ;
ALN/Q_length_ratio=0.509 ; DESCRIPTION=SecF protein
OS=Rhodopirellula maiorica SM1 GN=RMSM_04349 PE=3 SV=1 ;
EVALUE=3e-95 ; Q/S_length_ratio=1.058"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E8R0B2|E8R0B2_ISOPI ;
ALN/Q_length_ratio=0.552 ; DESCRIPTION=Protein-export
membrane protein SecD OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_1655 PE=3 SV=1 ;
EVALUE=3e-94 ; Q/S_length_ratio=1.067"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TM36|M5TM36_9PLAN ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=SecF protein
OS=Rhodopirellula sp. SWK7 GN=RRSWK_02909 PE=3 SV=1 ;
EVALUE=8e-93 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5TSP7|M5TSP7_9PLAN ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=SecF protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_06485 PE=3 SV=1
; EVALUE=2e-92 ; Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F0SG09|F0SG09_PLABD ;
ALN/Q_length_ratio=0.309 ; DESCRIPTION=Protein-export
membrane protein SecD OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=Plabr_0671 PE=3 SV=1 ; EVALUE=4e-75 ;
Q/S_length_ratio=1.184"
/note="Pfam_scan:hit_1 (408..589);
Pfam:PF02355.11:SecD_SecF;
Pfam_type:Family;HMM_aln_Length:168; HMM_Length:189;
EVALUE:3.2e-22; BITSCORE: 78.6"
/note="Pfam_scan:hit_2 (918..1120);
Pfam:PF02355.11:SecD_SecF;
Pfam_type:Family;HMM_aln_Length:176; HMM_Length:189;
EVALUE:1.5e-48; BITSCORE: 164.5"
/note="GO_domain:GO:0022857"
/note="GO_domain:GO:0008565"
/note="GO_domain:GO:0009536"
BEGIN
1 MQRNFIRGLL ICLVPCLVAA VFAVQPQKYR LGIDLAGGTI LVYEINLERT AARKAALGDS
61 SGQSDPRAPG ASAPQELSTE EMNNLAAQIK RRIDPTDIKN VTVRPLGRTR LEIILPTGGA
121 SSGRANLSKE DIEEVKRLIS QMGVLEFRIL ANGVDDQAGI LAARQLLEAK SPADLEGLAR
181 RGDVPPAPVE TFNVDIGDSK ATVRYVWSEV GPEERKSLGL SNEQEGDPRW GVLAAQRDKP
241 VPVRDGSPVD YVNCNMLIFS RKVTSTERLA KEEMDEKRLR AENPDKSEDE VKAMVNRKKY
301 EYFILTRVSP EDSLRVGGEI TISANSTKDR SENPAVGFTF NSAGGRQFGK ITRRNKPTGG
361 THRNLAILLD DRIVSAPTLQ SEITDQGQIT GKFDRKSVDR LVHILRSGAL SAELREKPVS
421 ENTIGPTLGA DTIFRGTTAI GFAFVAVLVF MVVYYRFAGM VACVALFANL LLTIGFMVAV
481 NAAFTLPGLA GLVLTLGMAV DANVLIYERL REERNKGANI ATALRNGYER AFLTIIDTHL
541 TSIFTAIVLY SAGNDQLKGF AISLSVGLII SLFTSLYMTR LMFDFWLHKR WLTELKMMRL
601 FERPNFNPMR YRRIFFSITG VLTVAGLALF LHRGEDGLNV DFRGGTVFAG KLKTGEERGL
661 TKTSDDKPGF RELLSEESQK ANLAVKPGDD AIVWENKPSG DEAVNVWIYT VTYTDGTEHT
721 VTLTAKPAGN TEAEMREDVR ARVSSLPDVS VEQMFLTGED YGSGKSRYFT VRTTEKQRQI
781 VQLTLDRLLR AKDVSIMDGA TMSYPEEEVE LEIEKDGKKV KEKQRVPVVA NGVITLTFDK
841 PTSRNFTQEL FDIEFRKQSS DRTDTFTLTG VGEPVEGRYT QMKLDVSKNP ALSLLAAPVA
901 PETAAKRGTQ LLSLKKVLAG AKRAFDSTPE PERLEVFDSQ LASDTREKAL IAITLSWIAI
961 LLYLWFRFGN WTFGLAAVIC LVHDLCFTIG AIAACHYLHL IPGLGFLGIE DFKIDLTTVA
1021 ALLTLVGYSV NEIIVNFARI REVRGKNPTL TPQMINDSVN QTLSRTILTS MTVFLASMVL
1081 YIFGGEGVHL FAFVMVMGVL VSTYSSIFVA SPLLLFLGEG RDGTGAAPEE TPEEKEEGAE
1141 EEVVEG
//