LOCUS VTR92672.1 621 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 30s ribosomal protein s1 : 30S ribosomal
protein S1 OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_1182 PE=3 SV=1: S1: S1: S1: S1:
S1: S1 protein.
ACCESSION LR593886-1973
PROTEIN_ID VTR92672.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_50420"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|H5SCE1|H5SCE1_9BACT ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=30S ribosomal
protein S1 OS=uncultured planctomycete GN=HGMM_F09D09C21
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6CCQ5|A6CCQ5_9PLAN ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=30S ribosomal
protein S1 OS=Planctomyces maris DSM 8797 GN=PM8797T_32295
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5SAV7|M5SAV7_9PLAN ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula europaea SH398 GN=RESH_04664
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5T6U7|M5T6U7_9PLAN ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula sp. SWK7 GN=RRSWK_02876 PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SWV2|D5SWV2_PLAL2 ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=30S ribosomal
protein S1 OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=Plim_1620 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.040"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7UVM0|Q7UVM0_RHOBA ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica (strain SH1)
GN=RB2543 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.899"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5R7K4|M5R7K4_9PLAN ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula maiorica SM1 GN=RMSM_07720
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M2B684|M2B684_9PLAN ;
ALN/Q_length_ratio=0.889 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula europaea 6C GN=RE6C_01801
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5DCW8|K5DCW8_RHOBT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica SH28 GN=RBSH_03992
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L0DDR8|L0DDR8_SINAD ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=30S ribosomal
protein S1 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2503
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DD27|L0DD27_SINAD ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=30S ribosomal
protein S1 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2238
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L7CE68|L7CE68_RHOBT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica SWK14 GN=RBSWK_03743
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2AL54|F2AL54_RHOBT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica WH47 GN=rpsA PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5U5M2|M5U5M2_9PLAN ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula sallentina SM41 GN=RSSM_01830
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8R5M0|E8R5M0_ISOPI ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=30S ribosomal
protein S1 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_1182 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.045"
/note="Pfam_scan:hit_1 (38..109); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:74;
EVALUE:3.8e-06; BITSCORE: 26.8"
/note="Pfam_scan:hit_2 (123..192); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:73; HMM_Length:74;
EVALUE:6.9e-11; BITSCORE: 42.0"
/note="Pfam_scan:hit_3 (209..281); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:74;
EVALUE:4.1e-21; BITSCORE: 74.8"
/note="Pfam_scan:hit_4 (294..368); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:74;
EVALUE:2.3e-19; BITSCORE: 69.2"
/note="Pfam_scan:hit_5 (381..455); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:74;
EVALUE:2.3e-18; BITSCORE: 66.0"
/note="Pfam_scan:hit_6 (469..542); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:74;
EVALUE:1.4e-23; BITSCORE: 82.7"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0006412"
BEGIN
1 MVNRNLLRQF DSAEDDILGI DDIFTKEISE WIQSEDQDYE ANKIVTGKVL EIRGDDVVID
61 IGYKSEGVIK LDEWREEGTD ASPPKPGDTV EVLLETVESE DGTIQLSYRK AKRQKEWNAI
121 LAKHKEGDVV AGKVLKKIKG GLLVNIGVNV FLPASQVDIR RPQSIDEYID RTIECVILKI
181 DEQRRNIVVS RRKLIEDRRK IQKDKLLGEL EIGQIRTGVV KNIAEFGAFV DLGGIDGLLH
241 ITDMGWHRVT NPRDVVQIDQ SLEVYILHID REKEKIALSL KHKTPSPWQN IEAKYPINSR
301 HNGEVVNIMP YGAFVKLEPG IEGLVHISEM SWVKRIADPK ELVQIGDKVE VQVLNINHDK
361 KEISLGMKQC QSNPWGEVAK KYPTGTVITG VVRNLTNYGA FIEIEEGIDG LLHVSDMSYV
421 RKVSNPSEVV QKGQKITCVV LSVDQERKRV ALGLKQMGND PWETDIPGRY KPGQKVQGKV
481 TKLTNFGVFV QLEEGLEGLL HISELSDDKI ESPEEVVKVG DDVDVKVLRV DAKDRKIGLS
541 MKNVDDNTVP DDVQDLPIEG PEAEKAMEEK LKATREKEAK KEKEGGSSGG GSKEAPKEKE
601 GLRGGTGAAG PLFQLPGDKK E
//