LOCUS VTR92631.1 348 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana abc-2 family transporter protein :
ABC multidrug efflux pump, inner membrane subunit OS=Koribacter
versatilis (strain Ellin345) GN=Acid345_0285 PE=4 SV=1:
ABC2_membrane_3 protein.
ACCESSION LR593886-1932
PROTEIN_ID VTR92631.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_50830"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q1IV10|Q1IV10_KORVE ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=ABC multidrug
efflux pump, inner membrane subunit OS=Koribacter
versatilis (strain Ellin345) GN=Acid345_0285 PE=4 SV=1 ;
EVALUE=1e-99 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|S4XQC4|S4XQC4_SORCE ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Transport permease
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_13235
PE=3 SV=1 ; EVALUE=2e-88 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D8Y5|L0D8Y5_SINAD ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=ABC-type multidrug
transport system, permease component OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1473 PE=4 SV=1 ; EVALUE=7e-88 ;
Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q08SM1|Q08SM1_STIAD ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=ABC transporter,
permease protein, ABC-2 family OS=Stigmatella aurantiaca
(strain DW4/3-1) GN=STAUR_6063 PE=4 SV=1 ; EVALUE=9e-87 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8R2X8|E8R2X8_ISOPI ;
ALN/Q_length_ratio=1.037 ; DESCRIPTION=ABC-2 type
transporter OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_0892 PE=4 SV=1 ; EVALUE=4e-79 ;
Q/S_length_ratio=0.872"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A085XB34|A0A085XB34_9DELT ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=ABC-type
transporter, permease protein OS=Enhygromyxa salina
GN=DB30_4335 PE=4 SV=1 ; EVALUE=4e-78 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A085WXM1|A0A085WXM1_9DELT ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=ABC-type
transporter, permease protein OS=Hyalangium minutum
GN=DB31_0697 PE=4 SV=1 ; EVALUE=4e-78 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q1DBX3|Q1DBX3_MYXXD ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=ABC transporter,
permease protein, ABC-2 family OS=Myxococcus xanthus
(strain DK 1622) GN=MXAN_1598 PE=4 SV=1 ; EVALUE=5e-68 ;
Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|S4Y7Y1|S4Y7Y1_SORCE ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_33565
PE=4 SV=1 ; EVALUE=1e-67 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F8C9T1|F8C9T1_MYXFH ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=ABC transporter
permease OS=Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
GN=LILAB_00745 PE=4 SV=1 ; EVALUE=6e-66 ;
Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A9G387|A9G387_SORC5 ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=Putative integral
membrane transport protein OS=Sorangium cellulosum (strain
So ce56) GN=sce5572 PE=4 SV=1 ; EVALUE=2e-64 ;
Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7U4H4|L7U4H4_MYXSD ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=ABC transporter
permease OS=Myxococcus stipitatus (strain DSM 14675 / JCM
12634 / Mx s8) GN=MYSTI_01726 PE=4 SV=1 ; EVALUE=5e-64 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|I4BAH1|I4BAH1_TURPD ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=ABC-2 type
transporter OS=Turneriella parva (strain ATCC BAA-1111 /
DSM 21527 / NCTC 11395 / H) GN=Turpa_3644 PE=4 SV=1 ;
EVALUE=9e-62 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K6SIZ8|K6SIZ8_LEPIR ;
ALN/Q_length_ratio=1.032 ; DESCRIPTION=ABC-2 family
transporter protein OS=Leptospira interrogans str.
2002000621 GN=LEP1GSC025_3392 PE=4 SV=1 ; EVALUE=1e-61 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|N1UPX5|N1UPX5_LEPIR ;
ALN/Q_length_ratio=1.032 ; DESCRIPTION=ABC-2 family
transporter protein OS=Leptospira interrogans serovar
Australis str. 200703203 GN=LEP1GSC115_5708 PE=4 SV=1 ;
EVALUE=1e-61 ; Q/S_length_ratio=0.967"
/note="Pfam_scan:hit_1 (19..343);
Pfam:PF12698.2:ABC2_membrane_3;
Pfam_type:Family;HMM_aln_Length:341; HMM_Length:344;
EVALUE:8.3e-28; BITSCORE: 97.4"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0006810"
BEGIN
1 MSPLWQLTLA RFREFYREPA ALFWVYGFPL ILACVLGMAF SEKPVPASNV DILLDPANPS
61 AAEKLREKLG ADPGLNIAFN DEATSRKRLR TSKTDVIVIP RPGTAGGHEY LFDETRSESV
121 LARNAADRAL LRSAHPTQAL PTETAVTEPG GRYIDFLIPG LLGMNLLGGG LFGVGFAVGD
181 LRVRKLLKRF QATPMRRSDF LLSMMLSRLA FTLIDIGLLL GFAYLAFGIR VRGNPLVFLS
241 LVAIGGAGFA GLGLLLGSRA RTMETVAGLV NAVMLPMYVL SGVFFSAARF PEGMQPFIQA
301 LPLTALNDGL RAVMNDGAGW EALPHPLIVL TLWGGISFAI ALRIFRWR
//