LOCUS VTR92544.1 1103 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana wd-40 repeat protein : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: WD40: WD40 protein.
ACCESSION LR593886-1845
PROTEIN_ID VTR92544.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_51700"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
ALN/Q_length_ratio=1.022 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=4e-94 ;
Q/S_length_ratio=0.952"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B7KD29|B7KD29_CYAP7 ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=WD-40 repeat
protein OS=Cyanothece sp. (strain PCC 7424)
GN=PCC7424_4792 PE=4 SV=1 ; EVALUE=1e-49 ;
Q/S_length_ratio=0.809"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B2IXC4|B2IXC4_NOSP7 ;
ALN/Q_length_ratio=0.501 ; DESCRIPTION=WD-40 repeat
protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=Npun_F1222 PE=4 SV=1 ; EVALUE=2e-48 ;
Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B8LXS9|B8LXS9_TALSN ;
ALN/Q_length_ratio=0.479 ; DESCRIPTION=G-protein beta
WD-40 repeats containing protein, putative OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=TSTA_062310 PE=4 SV=1 ; EVALUE=3e-47 ;
Q/S_length_ratio=0.685"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B5VVI6|B5VVI6_ARTMA ;
ALN/Q_length_ratio=0.507 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_0527
PE=4 SV=1 ; EVALUE=1e-46 ; Q/S_length_ratio=1.331"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K9V395|K9V395_9CYAN ;
ALN/Q_length_ratio=0.481 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_2739 PE=4 SV=1 ; EVALUE=1e-46 ;
Q/S_length_ratio=0.692"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F4XNH8|F4XNH8_9CYAN ;
ALN/Q_length_ratio=0.526 ; DESCRIPTION=WD-40
repeat-containing protein OS=Moorea producens 3L
GN=LYNGBM3L_24300 PE=4 SV=1 ; EVALUE=4e-46 ;
Q/S_length_ratio=0.682"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B7K750|B7K750_CYAP7 ;
ALN/Q_length_ratio=0.478 ; DESCRIPTION=WD-40 repeat
protein OS=Cyanothece sp. (strain PCC 7424)
GN=PCC7424_1167 PE=4 SV=1 ; EVALUE=2e-45 ;
Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A7ERN6|A7ERN6_SCLS1 ;
ALN/Q_length_ratio=0.374 ; DESCRIPTION=Putative
uncharacterized protein OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_07990 PE=4 SV=1
; EVALUE=1e-44 ; Q/S_length_ratio=1.863"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0EB01|A0EB01_PARTE ;
ALN/Q_length_ratio=0.392 ; DESCRIPTION=Chromosome
undetermined scaffold_87, whole genome shotgun sequence
OS=Paramecium tetraurelia GN=GSPATT00025202001 PE=4 SV=1 ;
EVALUE=1e-44 ; Q/S_length_ratio=1.501"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|X6PA04|X6PA04_RETFI ;
ALN/Q_length_ratio=0.498 ; DESCRIPTION=G-protein beta
WD-40 repeats containing protein (Fragment)
OS=Reticulomyxa filosa GN=RFI_02058 PE=4 SV=1 ;
EVALUE=2e-44 ; Q/S_length_ratio=1.491"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|X6MEE5|X6MEE5_RETFI ;
ALN/Q_length_ratio=0.522 ; DESCRIPTION=G-protein beta
WD-40 repeats containing protein OS=Reticulomyxa filosa
GN=RFI_25013 PE=4 SV=1 ; EVALUE=3e-44 ;
Q/S_length_ratio=1.310"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E4N1F8|E4N1F8_KITSK ;
ALN/Q_length_ratio=0.475 ; DESCRIPTION=Uncharacterized
protein OS=Kitasatospora setae (strain ATCC 33774 / DSM
43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
GN=KSE_62270 PE=4 SV=1 ; EVALUE=1e-43 ;
Q/S_length_ratio=0.794"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0YMI4|A0YMI4_LYNSP ;
ALN/Q_length_ratio=0.518 ; DESCRIPTION=WD-40 repeat
protein OS=Lyngbya sp. (strain PCC 8106) GN=L8106_17667
PE=4 SV=1 ; EVALUE=1e-43 ; Q/S_length_ratio=0.806"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F4KU47|F4KU47_HALH1 ;
ALN/Q_length_ratio=0.526 ; DESCRIPTION=(Myosin
heavy-chain) kinase., Histone acetyltransferase
OS=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM
1100 / LMG 10767 / O) GN=Halhy_2265 PE=4 SV=1 ;
EVALUE=1e-43 ; Q/S_length_ratio=0.977"
/note="Pfam_scan:hit_1 (51..122);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71;
EVALUE:2.2e-09; BITSCORE: 36.7"
/note="Pfam_scan:hit_2 (143..196);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54;
EVALUE:2.4e-10; BITSCORE: 39.7"
/note="Pfam_scan:hit_3 (556..584); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:24; HMM_Length:39;
EVALUE:9.9e-05; BITSCORE: 22.0"
/note="Pfam_scan:hit_4 (769..800); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:29; HMM_Length:39;
EVALUE:1e-05; BITSCORE: 25.1"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MGKNTNHSET RGVTHPVLVR HLQNTSRVGV PDADLLDAYT RRRDSEAFAV LVRRYGPLVW
61 SVCRRQLRDT SSADDATQAT FLALVRRARW VRAATLAAWL VGVARRTSRK MLLSDLRRRR
121 REATAPPSPV VQPDTDMSVR DLLAVLDEEV EQLPLHYRSV LLACYWQGQT QAETAHQLGL
181 SAASVKGLLE RGRAKLLDRL RRRGVTADVA LRGMLAAPLA LAALPDRLRS QTTTLALTAS
241 VGTGWAPTAL VGLVAGVVAA IVGVTLAQSE GASPPPAAIA PTAVAARWGA PPMATDVDDD
301 PLPKSAILRL GTSRFKHPGN AIELILSPDD KTVVAYGGQW VTAWDASTGK KLWTAPSANS
361 GGGGTAGERL LVASPDGKRA IWVGARDRLE IADIASGKCA QISVKGEPKN LRVTAVDISP
421 GGNSLAVGTS IGVYLTDLTG AVHQKIANPG GKPAFGANGN DRLLFGGDYS FVRYAPGGKR
481 LAVVTSDAPK SLRFCDPDTL KEQSRIELTA YLVRLAFSPD GSRVAVTERD NAVRVYEVAG
541 GKRVHDWAVK LNNPFENYTS AVAWSPDGKW IAAGATDHAI YLWDAVTGKE AGRLTGSGWY
601 PWGLSFSSDS NVLFSTGWDG VVRRWDVAAA KQLPLPNGAV RGSDVVAASR DGSRVAFATE
661 TDEIHIVDVE TKKEVQRLKA ADCGVSRMAF SPDGKYLAIG GSHLTQVNVV LWNLATGTVA
721 RRWDWEKGRD PHAAVEDIQF SPDGSQIAAV VFRQHAAHVL TVREGARQVL PHQYIYGLDF
781 APDGTMLATV GWDRVIRLWN PKTGQVARQV EVPSKDKHDD VRMYAVRFSP DGRTLATAHM
841 RAHVSLWDVK SLQNKSRFEI GDFSRNALAY SSDGLRLATG NYQGVVVWDA QTGAKLWDRG
901 NMGDSVYTVE FGRDGRNVLA GGNGVGYLWD TRPGDPPRKE LPGLWADLIG DEAVAADRAF
961 WALAERPAEV VPLLATKTAV RTAREVNADQ VAKLIAKLGA DDFKTRETAE SELAKLGPGA
1021 QPQLVKALSV SDSPEARLRL GRLLARTADS DTTRRRYQRL TALLGQIDTP ESRKLLRTWG
1081 DTAVDSLSEY ATAALKRCSS RQP
//