LOCUS VTR92510.1 588 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna-directed dna polymerase : DNA polymerase
OS=Meiothermus silvanus (strain ATCC 700542 / DSM 9946
/ VI-R2) GN=Mesil_1349 PE=3 SV=1: DNA_pol_A_exo1: DNA_pol_A
protein.
ACCESSION LR593886-1811
PROTEIN_ID VTR92510.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_52040"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D7BEJ9|D7BEJ9_MEISD ;
ALN/Q_length_ratio=0.872 ; DESCRIPTION=DNA polymerase
OS=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 /
VI-R2) GN=Mesil_1349 PE=3 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=0.862"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8PMM3|E8PMM3_THESS ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=DNA polymerase
OS=Thermus scotoductus (strain ATCC 700910 / SA-01)
GN=polA1 PE=3 SV=1 ; EVALUE=1e-120 ;
Q/S_length_ratio=0.862"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|W2TZ61|W2TZ61_9DEIN ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=DNA polymerase
OS=Thermus sp. NMX2.A1 GN=TNMX_12765 PE=3 SV=1 ;
EVALUE=1e-120 ; Q/S_length_ratio=0.862"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|V5L7B3|V5L7B3_9DEIN ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=DNA polymerase
OS=Thermus antranikianii GN=pol11 PE=3 SV=1 ;
EVALUE=1e-120 ; Q/S_length_ratio=0.862"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|V5L7P7|V5L7P7_THEBO ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=DNA polymerase
OS=Thermus brockianus GN=pol3 PE=3 SV=1 ; EVALUE=1e-117 ;
Q/S_length_ratio=0.860"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K9VTB1|K9VTB1_9CYAN ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Oscillatoria nigro-viridis PCC 7112
GN=Osc7112_6601 PE=3 SV=1 ; EVALUE=1e-108 ;
Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9WPA2|K9WPA2_9CYAN ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=DNA polymerase I
family protein with 3'-5'-exonuclease and polymerase
domains OS=Microcoleus sp. PCC 7113 GN=Mic7113_6438 PE=3
SV=1 ; EVALUE=1e-107 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q24P92|Q24P92_DESHY ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Putative
uncharacterized protein OS=Desulfitobacterium hafniense
(strain Y51) GN=DSY4361 PE=3 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B8FYE5|B8FYE5_DESHD ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Desulfitobacterium hafniense (strain DCB-2 /
DSM 10664) GN=Dhaf_0971 PE=3 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A098B8A8|A0A098B8A8_DESHA ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=DNA polymerase I
OS=Desulfitobacterium hafniense GN=DPCES_4731 PE=4 SV=1 ;
EVALUE=1e-107 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|G9XHX0|G9XHX0_DESHA ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Desulfitobacterium hafniense DP7
GN=HMPREF0322_00546 PE=3 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|H9ZTN2|H9ZTN2_THETH ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=DNA polymerase
OS=Thermus thermophilus JL-18 GN=TtJL18_1826 PE=3 SV=1 ;
EVALUE=1e-104 ; Q/S_length_ratio=0.848"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U2EG98|U2EG98_9FIRM ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=DNA polymerase
OS=Clostridiales bacterium oral taxon 876 str. F0540
GN=HMPREF1982_02859 PE=3 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A3IRZ6|A3IRZ6_9CHRO ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=DNA polymerase
OS=Cyanothece sp. CCY0110 GN=CY0110_32040 PE=3 SV=1 ;
EVALUE=1e-101 ; Q/S_length_ratio=0.888"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K9VTB5|K9VTB5_9CYAN ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=DNA polymerase
OS=Oscillatoria nigro-viridis PCC 7112 GN=Osc7112_6309
PE=3 SV=1 ; EVALUE=1e-101 ; Q/S_length_ratio=0.983"
/note="Pfam_scan:hit_1 (1..174);
Pfam:PF01612.15:DNA_pol_A_exo1;
Pfam_type:Domain;HMM_aln_Length:169; HMM_Length:176;
EVALUE:2.6e-21; BITSCORE: 75.9"
/note="Pfam_scan:hit_2 (247..585);
Pfam:PF00476.15:DNA_pol_A;
Pfam_type:Family;HMM_aln_Length:309; HMM_Length:383;
EVALUE:1.1e-57; BITSCORE: 195.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0005622"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:2.7.7.7"
BEGIN
1 MVKTAAGVEV IAAAVAEWSG PVALETTELD PTRDRVRLVQ IGIGDEVALI DLFALSDPSA
61 DLAPLFAALA GKEVVGHNVQ FDLRMLAPLG FVPGRVYDTM LASKVLHAGG REETNARLKH
121 GLADVAEREL GRELDKGEQG SDWSGQLSAK QLVYTATDAA VLLPLAAVLT ERLAAAKLTE
181 TADREMRALP GIAWAELIAV DTRGWLALAA AAETERASLA TAMDTTAPNP AGLPGMETRN
241 WDSPTQVKDA FAQVGVTIGA TDDDTLAGVP HPLAGMLCDY RAAAKRVGTY GRAWVEKHVG
301 ANDLVLPSWN QLGAESGRMS CSDPNLQQIP RGSEYRRCFV ARPGRVLLKA DYSQVELRIA
361 AKVANEGVMI AAYRDGRDLH TLTAARVLNK PEADVTKADR QLAKAVNFGL LYGVGWRGLK
421 QYAQANYGVA LTDTQARGYR EAFFRAYPAF RAWHARTEAH VKKLFDATLE GVHPVHTLGG
481 RRRLLPVSKT GADGTRYPNK TDALNTPVQG TGADGLKVAI ALLWERRDCS GAPVPVIFCH
541 DEIVLEVPEA HAEQGADWLR GCMIEAVAPL IDSVPVEVEV TTGCLRCG
//