LOCUS VTR92495.1 1174 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana wd-40 repeat protein : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: WD40: PD40: WD40:
WD40: WD40 protein.
ACCESSION LR593886-1796
PROTEIN_ID VTR92495.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_52190"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B2IXC4|B2IXC4_NOSP7 ;
ALN/Q_length_ratio=0.492 ; DESCRIPTION=WD-40 repeat
protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=Npun_F1222 PE=4 SV=1 ; EVALUE=3e-68 ;
Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K9V395|K9V395_9CYAN ;
ALN/Q_length_ratio=0.486 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_2739 PE=4 SV=1 ; EVALUE=1e-67 ;
Q/S_length_ratio=0.736"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K9QMP1|K9QMP1_NOSS7 ;
ALN/Q_length_ratio=0.450 ; DESCRIPTION=WD40
repeat-containing protein OS=Nostoc sp. (strain ATCC 29411
/ PCC 7524) GN=Nos7524_0419 PE=4 SV=1 ; EVALUE=1e-62 ;
Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|X0KUP7|X0KUP7_FUSOX ;
ALN/Q_length_ratio=0.531 ; DESCRIPTION=Uncharacterized
protein OS=Fusarium oxysporum f. sp. vasinfectum 25433
GN=FOTG_18972 PE=4 SV=1 ; EVALUE=6e-62 ;
Q/S_length_ratio=1.316"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E4TH64|E4TH64_CALNY ;
ALN/Q_length_ratio=0.503 ; DESCRIPTION=WD40 repeat,
subgroup OS=Calditerrivibrio nitroreducens (strain DSM
19672 / NBRC 101217 / Yu37-1) GN=Calni_0847 PE=4 SV=1 ;
EVALUE=7e-62 ; Q/S_length_ratio=1.113"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0YMI4|A0YMI4_LYNSP ;
ALN/Q_length_ratio=0.456 ; DESCRIPTION=WD-40 repeat
protein OS=Lyngbya sp. (strain PCC 8106) GN=L8106_17667
PE=4 SV=1 ; EVALUE=3e-59 ; Q/S_length_ratio=0.858"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|C7RS72|C7RS72_ACCPU ;
ALN/Q_length_ratio=0.530 ; DESCRIPTION=WD-40 repeat
protein OS=Accumulibacter phosphatis (strain UW-1)
GN=CAP2UW1_2609 PE=4 SV=1 ; EVALUE=2e-57 ;
Q/S_length_ratio=0.676"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B7KD29|B7KD29_CYAP7 ;
ALN/Q_length_ratio=0.491 ; DESCRIPTION=WD-40 repeat
protein OS=Cyanothece sp. (strain PCC 7424)
GN=PCC7424_4792 PE=4 SV=1 ; EVALUE=4e-55 ;
Q/S_length_ratio=0.861"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|X6PA04|X6PA04_RETFI ;
ALN/Q_length_ratio=0.491 ; DESCRIPTION=G-protein beta
WD-40 repeats containing protein (Fragment)
OS=Reticulomyxa filosa GN=RFI_02058 PE=4 SV=1 ;
EVALUE=8e-55 ; Q/S_length_ratio=1.586"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|B8LXS9|B8LXS9_TALSN ;
ALN/Q_length_ratio=0.450 ; DESCRIPTION=G-protein beta
WD-40 repeats containing protein, putative OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=TSTA_062310 PE=4 SV=1 ; EVALUE=1e-54 ;
Q/S_length_ratio=0.729"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q10XW6|Q10XW6_TRIEI ;
ALN/Q_length_ratio=0.505 ; DESCRIPTION=WD-40 repeat
OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_3869
PE=4 SV=1 ; EVALUE=2e-54 ; Q/S_length_ratio=0.756"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B8MPL3|B8MPL3_TALSN ;
ALN/Q_length_ratio=0.549 ; DESCRIPTION=NACHT and WD40
domain protein OS=Talaromyces stipitatus (strain ATCC
10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_106620
PE=4 SV=1 ; EVALUE=2e-54 ; Q/S_length_ratio=0.648"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K9UUN2|K9UUN2_9CYAN ;
ALN/Q_length_ratio=0.492 ; DESCRIPTION=WD-40
repeat-containing protein OS=Calothrix sp. PCC 6303
GN=Cal6303_0173 PE=4 SV=1 ; EVALUE=4e-54 ;
Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E0UJ20|E0UJ20_CYAP2 ;
ALN/Q_length_ratio=0.486 ; DESCRIPTION=WD40 repeat,
subgroup OS=Cyanothece sp. (strain PCC 7822)
GN=Cyan7822_2631 PE=4 SV=1 ; EVALUE=5e-54 ;
Q/S_length_ratio=0.924"
/note="Pfam_scan:hit_1 (45..115);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71;
EVALUE:6.8e-08; BITSCORE: 32.0"
/note="Pfam_scan:hit_2 (137..190);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54;
EVALUE:8.3e-13; BITSCORE: 47.5"
/note="Pfam_scan:hit_3 (324..358); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:29; HMM_Length:39;
EVALUE:0.00052; BITSCORE: 19.8"
/note="Pfam_scan:hit_4 (531..557); Pfam:PF07676.7:PD40;
Pfam_type:Repeat;HMM_aln_Length:16; HMM_Length:39;
EVALUE:0.0051; BITSCORE: 16.4"
/note="Pfam_scan:hit_5 (715..743); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:25; HMM_Length:39;
EVALUE:0.0039; BITSCORE: 17.0"
/note="Pfam_scan:hit_6 (820..843); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:39;
EVALUE:0.0036; BITSCORE: 17.1"
/note="Pfam_scan:hit_7 (956..993); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:36; HMM_Length:39;
EVALUE:0.008; BITSCORE: 16.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSTPETGRLM REVQNLIGDA REDVPDGDLV ARFVDRRDES AFECLVRRYS RLVFGVCRRV
61 LVDPNAADDA FQATFLVLVH RAAAIDRSRP VSDWLYTVAF RLACRARANA ARRQRLEATG
121 AQFRPVIAPP CAPEDGHTVL HEELNRLPEQ YRVPLVLSYL EGRTYEQVAQ AIGCPVGSVG
181 WRLTRAREAL RVRLTSRGVV CPAAGVATLI ASAGTGTAAP APLFDTTVRA GLWFAGRSAD
241 GTVHAAPSAQ VLELARGTIG TMTTSKWVAA AVVLAVGLCG GTAWLARSAA MSAPPPTVAD
301 QPAPTAKPAK LSEVPDGASA RMGTAQFRHG DVVFFIAYTA DGKGIVTAGR DNTVRLWDRT
361 TGQVVRQFER AEGKKEPLAQ KPAMPAMSGK MMSTTPPDDF PVALAPDGKT LAAGKDRTIT
421 VWETATGKKL PAMTTTAEVT ELEFTPDGRA LVSADANGAV VLWNPVEGTA RKTFEPKADG
481 KGATKTGAAV SPTGTHVVQQ LIEPETANGS LRITELATGT ALPDIKLSVG GAQNIAFSPD
541 GKYLAWASFT DGITVWDVGA HKEVNRFGSG TAMKPRFFGK SLRIAADNKT VAVTLSNDAI
601 ELWDVTEGKL KQTVGGYTAE PSGRVAVRIV RGGGNRMIST DLALAPDGKT VAVSLGSAAV
661 RQFDVETGKE IAATPGHLSG IMAVGSDGKT VVTVSRESVR VWDLAGGAVR HWALTPPATS
721 VAVAPDAKFV ATSSGKGVIR MWDAARGEPV REIDTKRGDV AGIAFSPDGK RLATKAELNS
781 AVNLWDATTG AHVRTIGQDG EPVFSGGRVT LDISGMQTPV IRFSPDGRLI AAASDKKQLR
841 VWDAATGTVV CDIAAPKSLG VAFEFSANGH VLALLTQDGT VTGYEIATGE KRFVTRGAGD
901 GSAANHPRDI AGGTAAISAL GRGFANAGAI GFTADGRFLF SAAGTSGLRA WDTLTGQEIG
961 HLKGHSGSVS HLCVANGGVL VTGSVDTTAL TWNLSKLARV ELTRDTPLPA GDLDQLWADL
1021 AKPDPAVALT AARKLLTGRK QAVTYLSERL RPVPVVEDAR ITELVTDLGG NFNARRKATA
1081 ELERLGAVAA PHLRKALEGT PPLDLKQRVE ALLQKAIVSK LTEDQLRDLR TVEVLEQAAT
1141 PEATRVLETL AKGAKGARLT LEASAALARL TATK
//