LOCUS VTR92453.1 440 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna-directed dna polymerase : DNA polymerase
OS=Meiothermus silvanus (strain ATCC 700542 / DSM 9946
/ VI-R2) GN=Mesil_1349 PE=3 SV=1: DNA_pol_A_exo1: DNA_pol_A
protein.
ACCESSION LR593886-1754
PROTEIN_ID VTR92453.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_52610"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D7BEJ9|D7BEJ9_MEISD ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=DNA polymerase
OS=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 /
VI-R2) GN=Mesil_1349 PE=3 SV=1 ; EVALUE=4e-89 ;
Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|V5L7B3|V5L7B3_9DEIN ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA polymerase
OS=Thermus antranikianii GN=pol11 PE=3 SV=1 ; EVALUE=6e-87
; Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W2TZ61|W2TZ61_9DEIN ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA polymerase
OS=Thermus sp. NMX2.A1 GN=TNMX_12765 PE=3 SV=1 ;
EVALUE=1e-86 ; Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8PMM3|E8PMM3_THESS ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA polymerase
OS=Thermus scotoductus (strain ATCC 700910 / SA-01)
GN=polA1 PE=3 SV=1 ; EVALUE=3e-86 ;
Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|V5L7P7|V5L7P7_THEBO ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA polymerase
OS=Thermus brockianus GN=pol3 PE=3 SV=1 ; EVALUE=4e-86 ;
Q/S_length_ratio=0.643"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|H9ZTN2|H9ZTN2_THETH ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=DNA polymerase
OS=Thermus thermophilus JL-18 GN=TtJL18_1826 PE=3 SV=1 ;
EVALUE=2e-79 ; Q/S_length_ratio=0.635"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9ZQM1|K9ZQM1_ANACC ;
ALN/Q_length_ratio=1.020 ; DESCRIPTION=DNA polymerase
OS=Anabaena cylindrica (strain ATCC 27899 / PCC 7122)
GN=Anacy_5785 PE=3 SV=1 ; EVALUE=4e-76 ;
Q/S_length_ratio=0.728"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K9WPA2|K9WPA2_9CYAN ;
ALN/Q_length_ratio=1.016 ; DESCRIPTION=DNA polymerase I
family protein with 3'-5'-exonuclease and polymerase
domains OS=Microcoleus sp. PCC 7113 GN=Mic7113_6438 PE=3
SV=1 ; EVALUE=6e-76 ; Q/S_length_ratio=0.732"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A3IRZ6|A3IRZ6_9CHRO ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=DNA polymerase
OS=Cyanothece sp. CCY0110 GN=CY0110_32040 PE=3 SV=1 ;
EVALUE=5e-75 ; Q/S_length_ratio=0.665"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B1X218|B1X218_CYAA5 ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=DNA polymerase
OS=Cyanothece sp. (strain ATCC 51142) GN=cce_4831 PE=3
SV=1 ; EVALUE=8e-74 ; Q/S_length_ratio=0.665"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|N9XE58|N9XE58_9FIRM ;
ALN/Q_length_ratio=1.011 ; DESCRIPTION=Uncharacterized
protein OS=[Clostridium] hathewayi 12489931
GN=HMPREF1093_02951 PE=3 SV=1 ; EVALUE=8e-73 ;
Q/S_length_ratio=0.731"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K9Y0W1|K9Y0W1_STAC7 ;
ALN/Q_length_ratio=1.025 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Stanieria cyanosphaera (strain ATCC 29371 /
PCC 7437) GN=Sta7437_4572 PE=3 SV=1 ; EVALUE=1e-72 ;
Q/S_length_ratio=0.686"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K9X760|K9X760_9NOST ;
ALN/Q_length_ratio=1.011 ; DESCRIPTION=DNA polymerase I
family protein with 3'-5'-exonuclease and polymerase
domains OS=Cylindrospermum stagnale PCC 7417 GN=Cylst_6552
PE=3 SV=1 ; EVALUE=3e-72 ; Q/S_length_ratio=0.743"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K9VTB1|K9VTB1_9CYAN ;
ALN/Q_length_ratio=1.027 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Oscillatoria nigro-viridis PCC 7112
GN=Osc7112_6601 PE=3 SV=1 ; EVALUE=2e-70 ;
Q/S_length_ratio=0.712"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A061D4X6|A0A061D4X6_BABBI ;
ALN/Q_length_ratio=1.009 ; DESCRIPTION=DNA polymerase I,
putative OS=Babesia bigemina GN=BBBOND_0209000 PE=4 SV=1 ;
EVALUE=5e-70 ; Q/S_length_ratio=0.265"
/note="Pfam_scan:hit_1 (1..46);
Pfam:PF01612.15:DNA_pol_A_exo1;
Pfam_type:Domain;HMM_aln_Length:42; HMM_Length:176;
EVALUE:1.2e-06; BITSCORE: 28.0"
/note="Pfam_scan:hit_2 (126..440);
Pfam:PF00476.15:DNA_pol_A;
Pfam_type:Family;HMM_aln_Length:311; HMM_Length:383;
EVALUE:8.5e-53; BITSCORE: 179.3"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0005622"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:2.7.7.7"
BEGIN
1 MNRELDKTEQ AGEWSRPVLP RAQLEYAATD AAVLVPLADT LRTKAAARNL TAVLDLEMRC
61 GVPVARMAAT GVGFDTGTWL ALADAAAERR VTLATEMDAL VPNPNCLPGL GAWNSTTVDV
121 PAAFEAVGIA LPDTKEETLA GIAHPLARLL LEYREAAKRA GTYGREWVAE HVTDGRVRAS
181 WNPCQAKTGR MSCKEPNLQQ LPRNPRYRRC FTARSGHVLV KCDFSQIELR IAAKVTGDAH
241 AGGLSEGEDL HTLTAARFLG SQVDVVTKEA RQMAKPVNFG AIYGLGPRSL RLKAQADYGK
301 DMTEDQARGF LDAFFAQFPA VRAWHNRLKR DRATEVRTLG GRRIGVEPDQ FFGAKANYVV
361 QGTGGGGLKR APALLWECRD QCPNAEVVLA VHDEIVLEVP EPEREAAKTW LSGCMIDGMA
421 PLIDPVPVEV EVKVGATWAG
//