LOCUS VTR92378.1 487 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana glycine dehydrogenase subunit 2 : Probable
glycine dehydrogenase (decarboxylating) subunit 2 OS=uncultured
planctomycete GN=gcvPB PE=3 SV=1: GDC-P protein.
ACCESSION LR593886-1679
PROTEIN_ID VTR92378.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_53360"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R7Y1|D2R7Y1_PIRSD ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2 OS=Pirellula
staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128)
GN=gcvPB PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SQ45|D5SQ45_PLAL2 ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Glycine
dehydrogenase (aminomethyl-transferring) OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=Plim_2596 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K5D8X5|K5D8X5_RHOBT ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2
OS=Rhodopirellula baltica SH28 GN=gcvPB PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8QYA5|E8QYA5_ISOPI ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2 OS=Isosphaera
pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=gcvPB
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.940"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F2APR0|F2APR0_RHOBT ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2
OS=Rhodopirellula baltica WH47 GN=gcvPB PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A089JN24|A0A089JN24_9BACL ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2 OS=Paenibacillus
sp. FSL R5-0345 GN=gcvPB PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A3ZNJ9|A3ZNJ9_9PLAN ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Glycine
dehydrogenase (aminomethyl-transferring)
OS=Blastopirellula marina DSM 3645 GN=DSM3645_17120 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F0SIH1|F0SIH1_PLABD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Glycine
dehydrogenase (aminomethyl-transferring) OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=Plabr_1995 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7CMC9|L7CMC9_RHOBT ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2
OS=Rhodopirellula baltica SWK14 GN=gcvPB PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2ASZ3|M2ASZ3_9PLAN ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Glycine
dehydrogenase (aminomethyl-transferring) OS=Rhodopirellula
europaea 6C GN=RE6C_06176 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6CF78|A6CF78_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Glycine
dehydrogenase (aminomethyl-transferring) OS=Planctomyces
maris DSM 8797 GN=PM8797T_17934 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L0DKW6|L0DKW6_SINAD ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=gcvPB PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_11 ; ACCESSION=Q7UNH1 ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2
OS=Rhodopirellula baltica (strain SH1) GN=gcvPB PE=3 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5S2M4|M5S2M4_9PLAN ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Glycine
dehydrogenase (aminomethyl-transferring) OS=Rhodopirellula
europaea SH398 GN=RESH_03727 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SCP4|H5SCP4_9BACT ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 2 OS=uncultured
planctomycete GN=gcvPB PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.002"
/note="Pfam_scan:hit_1 (28..309); Pfam:PF02347.11:GDC-P;
Pfam_type:Family;HMM_aln_Length:260; HMM_Length:429;
EVALUE:1.8e-13; BITSCORE: 50.0"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0009056"
/note="GO_domain:GO:0006520"
/note="Enzyme_Code:EC:1.4.4.2"
BEGIN
1 MNNTQSTELI FELSKPGRRA HRLPACDVPA SKLLGELIPQ EHLASNPLPL PEVGEIDLIR
61 HYTNLSAQNM SIDTNFYPLG SCTMKYNPKR HERLAALPSY ANLHPLQDDD TTQGMLEILY
121 EMQQFLAEIS GLPAVSLQPA AGAHGELTAL FVAAAYFRDK GETHRKKVLV PDSAHGTNPA
181 SAALAGFDTI TVKSGANGLV DLEDLKSKLG DDTAVFMITN PNTLGLFETQ IKTITDLLHS
241 KGALVYLDGA NMNAILGITR PGDFGADMQH YNVHKTFTGP HGGGGPGSGP IAVRDFLAPY
301 LPAPVVVKDG ARFKLDFDMP KSIGRVRSFF GNVGILFRGY CYIRTLGPDG LKQVSEQAVL
361 NANYLRARVT EGFDVPHPGP CMHEFVASAR ALVRERKITA KDVCKRLLDF GFHAPTVYFP
421 MVVAEALMME PTETESKETL DAFADTLLKI KAEDPDVVKT APHTHIVSRP DEVKAAKELK
481 LRWSPAK
//