LOCUS VTR92376.1 448 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana glycine dehydrogenase subunit 1 : Probable
glycine dehydrogenase (decarboxylating) subunit 1 OS=Blastopirellula
marina DSM 3645 GN=gcvPA PE=3 SV=1: GDC-P protein.
ACCESSION LR593886-1677
PROTEIN_ID VTR92376.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_53380"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DLE0|L0DLE0_SINAD ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=gcvPA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2R7Y2|D2R7Y2_PIRSD ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Pirellula
staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128)
GN=gcvPA PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZNK0|A3ZNK0_9PLAN ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1
OS=Blastopirellula marina DSM 3645 GN=gcvPA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6CF77|A6CF77_9PLAN ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Planctomyces
maris DSM 8797 GN=gcvPA PE=3 SV=1 ; EVALUE=1e-173 ;
Q/S_length_ratio=1.023"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5SQ44|D5SQ44_PLAL2 ;
ALN/Q_length_ratio=1.007 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=gcvPA PE=3 SV=1 ; EVALUE=1e-171 ;
Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F0SIH2|F0SIH2_PLABD ;
ALN/Q_length_ratio=0.998 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=gcvPA PE=3 SV=1 ;
EVALUE=1e-162 ; Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A074LQ99|A0A074LQ99_9BACL ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Tumebacillus
flagellatus GN=gcvPA PE=3 SV=1 ; EVALUE=1e-162 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E8QZW5|E8QZW5_ISOPI ;
ALN/Q_length_ratio=1.002 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Isosphaera
pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=gcvPA
PE=3 SV=1 ; EVALUE=1e-162 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|T0MRT1|T0MRT1_9BACT ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=candidate
division ZIXI bacterium RBG-1 GN=gcvPA PE=3 SV=1 ;
EVALUE=1e-157 ; Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A075KH20|A0A075KH20_9FIRM ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Pelosinus sp.
UFO1 GN=gcvPA PE=3 SV=1 ; EVALUE=1e-156 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|T0JX02|T0JX02_9FIRM ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Sporomusa
ovata DSM 2662 GN=gcvPA1 PE=3 SV=1 ; EVALUE=1e-156 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|H6LK87|H6LK87_ACEWD ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1
OS=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 /
JCM 2381 / KCTC 1655) GN=gcvPA PE=3 SV=1 ; EVALUE=1e-155 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_13 ; ACCESSION=A4J2F8 ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1
OS=Desulfotomaculum reducens (strain MI-1) GN=gcvPA PE=3
SV=1 ; EVALUE=1e-155 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I9B1G5|I9B1G5_9FIRM ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Pelosinus
fermentans B4 GN=gcvPA PE=3 SV=1 ; EVALUE=1e-154 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I9NPG5|I9NPG5_9FIRM ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Probable glycine
dehydrogenase (decarboxylating) subunit 1 OS=Pelosinus
fermentans JBW45 GN=gcvPA PE=3 SV=1 ; EVALUE=1e-154 ;
Q/S_length_ratio=1.000"
/note="Pfam_scan:hit_1 (1..444); Pfam:PF02347.11:GDC-P;
Pfam_type:Family;HMM_aln_Length:425; HMM_Length:429;
EVALUE:2.4e-125; BITSCORE: 418.5"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0009056"
/note="GO_domain:GO:0006520"
/note="GO_domain:GO:0034641"
/note="Enzyme_Code:EC:1.4.4.2"
BEGIN
1 MSYVLNTPED QKAMLAKIGV SSVEDLFANI PTALRLQRDL AIPNAMSEME LQSHLSRLLG
61 KNQSASDAVC FLGGGAYDHF IPSVIDAIAG RSEFYTAYTP YQAEASQGTL QAIFEYQTLM
121 CELTGLGVAN ASLYEGGSSV TEAALMALGI TKRPEVLIAE SVHPEYRQTL ETYAANLNCR
181 VRTLPTPDGF LNPDDVKNAV SDATACVIVQ SPNFFGHLEE MQAIGDAARK VGALFVASFD
241 PVSVGVLKRP GDYGADIAVA EGQGLGVPLQ YGGPYLGILA CHEDSRFLRK IPGRLVGQTT
301 DRNGKRSWVL TLQPREQHIA RANATSNICT NQGLLALRAA VYLTAVGPQG LKETAELCVR
361 KAHYAAEQLT KVPGVSLRFK TPFVKEFALQ VPGDAAALLA KLRTAGYHAG LPLGRWYPAL
421 ANCITVAVTE KRTKAEIDGL VEALKANV
//