LOCUS VTR92315.1 429 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana -dihydroxy-2-butanone 4-phosphate synthase
: Riboflavin biosynthesis protein RibBA OS=Thermodesulfobacterium
commune DSM 2178 GN=ribBA PE=3 SV=1: DHBP_synthase: GTP_cyclohydro2
protein.
ACCESSION LR593886-1616
PROTEIN_ID VTR92315.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_53990"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A075WSK3|A0A075WSK3_9BACT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Thermodesulfobacterium
commune DSM 2178 GN=ribBA PE=3 SV=1 ; EVALUE=1e-164 ;
Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F8C5S1|F8C5S1_THEGP ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Thermodesulfobacterium
geofontis (strain OPB45) GN=ribBA PE=3 SV=1 ;
EVALUE=1e-162 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B9XST3|B9XST3_PEDPL ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Pedosphaera parvula (strain
Ellin514) GN=ribBA PE=3 SV=1 ; EVALUE=1e-160 ;
Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F8AC97|F8AC97_THEID ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Thermodesulfatator indicus
(strain DSM 15286 / JCM 11887 / CIR29812) GN=ribBA PE=3
SV=1 ; EVALUE=1e-160 ; Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B5YHZ1|B5YHZ1_THEYD ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=ribBA PE=3 SV=1 ; EVALUE=1e-158 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A0A2TKP1|A0A0A2TKP1_9FIRM ;
ALN/Q_length_ratio=0.918 ;
DESCRIPTION=3,4-dihydroxy-2-butanone 4-phosphate synthase
OS=Desulfosporosinus sp. Tol-M GN=JT05_13145 PE=4 SV=1 ;
EVALUE=1e-157 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W0JK50|W0JK50_DESAE ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Desulfurella acetivorans A63
GN=ribBA PE=3 SV=1 ; EVALUE=1e-157 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A099SCL8|A0A099SCL8_9FIRM ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Desulfosporosinus sp. HMP52
GN=ribBA PE=3 SV=1 ; EVALUE=1e-157 ;
Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|J7IWD2|J7IWD2_DESMD ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Desulfosporosinus meridiei
(strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10)
GN=ribBA PE=3 SV=1 ; EVALUE=1e-157 ;
Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|G7WBM5|G7WBM5_DESOD ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Desulfosporosinus orientis
(strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628)
GN=ribBA PE=3 SV=1 ; EVALUE=1e-156 ;
Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|G2FL94|G2FL94_9FIRM ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Desulfosporosinus sp. OT
GN=ribBA PE=3 SV=1 ; EVALUE=1e-156 ;
Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S0FKM7|S0FKM7_9FIRM ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=[Clostridium] termitidis
CT1112 GN=ribBA PE=3 SV=1 ; EVALUE=1e-155 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H5Y4Z7|H5Y4Z7_9FIRM ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Desulfosporosinus youngiae
DSM 17734 GN=ribBA PE=3 SV=1 ; EVALUE=1e-155 ;
Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I4D7W7|I4D7W7_DESAJ ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=Desulfosporosinus
acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) GN=ribBA
PE=3 SV=1 ; EVALUE=1e-154 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|W4VAA5|W4VAA5_9FIRM ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Riboflavin
biosynthesis protein RibBA OS=[Clostridium]
straminisolvens JCM 21531 GN=ribBA PE=3 SV=1 ;
EVALUE=1e-154 ; Q/S_length_ratio=1.031"
/note="Pfam_scan:hit_1 (11..205);
Pfam:PF00926.14:DHBP_synthase;
Pfam_type:Family;HMM_aln_Length:193; HMM_Length:194;
EVALUE:1.7e-66; BITSCORE: 223.1"
/note="Pfam_scan:hit_2 (212..397);
Pfam:PF00925.15:GTP_cyclohydro2;
Pfam_type:Family;HMM_aln_Length:167; HMM_Length:169;
EVALUE:2e-71; BITSCORE: 238.7"
/note="GO_domain:GO:0016810"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0016829"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="Enzyme_Code:EC:3.5.4"
/note="Enzyme_Code:EC:3.5.4.25"
/note="Enzyme_Code:EC:4.1.99.12"
BEGIN
1 MPRTAEGFCS IDAALDDLRA GRMIVLVDDE HRENEGDLVM AAEAVTPAAI NFMIRYACGR
61 LCVSFSRPHA ERLGLELLPG VNLDPAATPF THNFDARFGI STGISAFDRA RTVQVCADPA
121 SGPQDLVRDK GHVDGLIARP GGVLVRAGHT EGSVDLCRLA GLREIAVICE VLNEDGSMAR
181 LPDLREFCVK HELKMCTIAD LIEHRRRREK LIKREISLKL PTEFGTFDLF AYTSMVDQEP
241 HLALTLGGIG LSTAEASEPG PPSVPVQTES VLVRMHSECL TGDVLHSTKC DCGPQLKYAM
301 QQVAEAGRGV IVYMRQEGRG IGLLNKLKAY KLQQEEGLDT VEANKRLGFA PDLRHFGIGA
361 QILHDLGVRD IKLLTNNPRK VIGLEGYGLR IVERVPIQMQ PGDHNRDYLQ TKKDKLGHLL
421 DEFETGGGD
//