LOCUS VTR92292.1 682 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana nadh dehydrogenase : Respiratory-chain
NADH dehydrogenase domain 51 kDa subunit OS=Rhodopirellula
sallentina SM41 GN=RSSM_02690 PE=4 SV=1: 2Fe-2S_thioredx:
Complex1_51K: SLBB: NADH_4Fe-4S protein.
ACCESSION LR593886-1593
PROTEIN_ID VTR92292.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_54220"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5UIK4|M5UIK4_9PLAN ;
ALN/Q_length_ratio=0.856 ; DESCRIPTION=Respiratory-chain
NADH dehydrogenase domain 51 kDa subunit OS=Rhodopirellula
sallentina SM41 GN=RSSM_02690 PE=4 SV=1 ; EVALUE=1e-153 ;
Q/S_length_ratio=1.164"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5T5F7|M5T5F7_9PLAN ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=Respiratory-chain
NADH dehydrogenase domain 51 kDa subunit OS=Rhodopirellula
sp. SWK7 GN=RRSWK_03150 PE=4 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.162"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R3Z1|E8R3Z1_ISOPI ;
ALN/Q_length_ratio=0.817 ; DESCRIPTION=Respiratory-chain
NADH dehydrogenase domain 51 kDa subunit OS=Isosphaera
pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_3157
PE=4 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=1.194"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5S926|M5S926_9PLAN ;
ALN/Q_length_ratio=0.696 ; DESCRIPTION=Respiratory-chain
NADH dehydrogenase domain 51 kDa subunit (Fragment)
OS=Rhodopirellula maiorica SM1 GN=RMSM_00397 PE=4 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=1.424"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W4LBL6|W4LBL6_9DELT ;
ALN/Q_length_ratio=0.786 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_30435 PE=4 SV=1 ; EVALUE=1e-108 ;
Q/S_length_ratio=1.256"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2PS76|D2PS76_KRIFD ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Respiratory-chain
NADH dehydrogenase domain 51 kDa subunit OS=Kribbella
flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)
GN=Kfla_2118 PE=4 SV=1 ; EVALUE=1e-86 ;
Q/S_length_ratio=1.207"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A066WS53|A0A066WS53_9FLAO ;
ALN/Q_length_ratio=0.594 ; DESCRIPTION=NADH dehydrogenase
OS=Flavobacterium sp. EM1321 GN=FEM21_01490 PE=4 SV=1 ;
EVALUE=5e-68 ; Q/S_length_ratio=1.499"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A0A2MQ49|A0A0A2MQ49_9FLAO ;
ALN/Q_length_ratio=0.562 ; DESCRIPTION=NADH dehydrogenase
OS=Flavobacterium suncheonense GH29-5 = DSM 17707
GN=Q764_02325 PE=4 SV=1 ; EVALUE=5e-68 ;
Q/S_length_ratio=1.499"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|C5CWS9|C5CWS9_VARPS ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Respiratory-chain
NADH dehydrogenase domain 51 kDa subunit OS=Variovorax
paradoxus (strain S110) GN=Vapar_4073 PE=4 SV=1 ;
EVALUE=1e-67 ; Q/S_length_ratio=1.114"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A086ARM7|A0A086ARM7_FLAHY ;
ALN/Q_length_ratio=0.594 ; DESCRIPTION=NADH dehydrogenase
OS=Flavobacterium hydatis GN=IW20_02335 PE=4 SV=1 ;
EVALUE=1e-67 ; Q/S_length_ratio=1.499"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A4SXW2|A4SXW2_POLSQ ;
ALN/Q_length_ratio=0.790 ; DESCRIPTION=NAD-dependent
formate dehydrogenase flavoprotein subunit
OS=Polynucleobacter necessarius subsp. asymbioticus
(strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1)
GN=Pnuc_1110 PE=4 SV=1 ; EVALUE=2e-67 ;
Q/S_length_ratio=1.137"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|H8XRG7|H8XRG7_FLAIG ;
ALN/Q_length_ratio=0.562 ; DESCRIPTION=NADH dehydrogenase
I, F subunit OS=Flavobacterium indicum (strain DSM 17447 /
CIP 109464 / GPTSA100-9) GN=nuoF PE=4 SV=1 ; EVALUE=5e-67
; Q/S_length_ratio=1.502"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A085ZS21|A0A085ZS21_9FLAO ;
ALN/Q_length_ratio=0.562 ; DESCRIPTION=NADH dehydrogenase
OS=Flavobacterium reichenbachii GN=IW19_17745 PE=4 SV=1 ;
EVALUE=5e-67 ; Q/S_length_ratio=1.499"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A5FKK2|A5FKK2_FLAJ1 ;
ALN/Q_length_ratio=0.562 ; DESCRIPTION=NADH dehydrogenase
subunit F OS=Flavobacterium johnsoniae (strain ATCC 17061
/ DSM 2064 / UW101) GN=nuoF PE=4 SV=1 ; EVALUE=6e-67 ;
Q/S_length_ratio=1.496"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|J3C1R2|J3C1R2_9FLAO ;
ALN/Q_length_ratio=0.562 ; DESCRIPTION=NADH-quinone
oxidoreductase, F subunit OS=Flavobacterium sp. CF136
GN=PMI10_02918 PE=4 SV=1 ; EVALUE=6e-67 ;
Q/S_length_ratio=1.496"
/note="Pfam_scan:hit_1 (1..144);
Pfam:PF01257.14:2Fe-2S_thioredx;
Pfam_type:Family;HMM_aln_Length:112; HMM_Length:145;
EVALUE:2.5e-18; BITSCORE: 66.0"
/note="Pfam_scan:hit_2 (244..415);
Pfam:PF01512.12:Complex1_51K;
Pfam_type:Family;HMM_aln_Length:145; HMM_Length:151;
EVALUE:3.1e-40; BITSCORE: 137.3"
/note="Pfam_scan:hit_3 (445..496); Pfam:PF10531.4:SLBB;
Pfam_type:Domain;HMM_aln_Length:55; HMM_Length:59;
EVALUE:4.1e-06; BITSCORE: 26.5"
/note="Pfam_scan:hit_4 (585..634);
Pfam:PF10589.4:NADH_4Fe-4S;
Pfam_type:Domain;HMM_aln_Length:34; HMM_Length:46;
EVALUE:4.8e-12; BITSCORE: 44.8"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0006091"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0051186"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006810"
/note="Enzyme_Code:EC:1.6.99.5"
/note="Enzyme_Code:EC:1.6.99.3"
/note="Enzyme_Code:EC:1.6.5.3"
BEGIN
1 MIVQRLRDIQ NRFGFLPDRE LKELSREIDV PMYRLEEVSS FFPAFKLERT NPPDIEMRVC
61 RDMTCHLRGS AALLNERTGL PVLATELSER TGKKICVEGV SCLGRCDRAP AVWVEKRPMP
121 EGVHAWVYAN RPGQDLEEVL RALADDRDPP APDPDAEYPP HTNSNRGYST PPSDGDNAHP
181 PLPAAGWSLD VYGRQRWPRD YRAIKRFTDY LSKLIRPLVP PPRDMGGKDL ENYVQRFHPL
241 LWELKTSNLL GMGGAGAPAY QKWLDVWRES GTEKYVVCNG DESEPGTFKD REILLRMPHL
301 VVEGVILAGL MTGGSAGYIF IRHEYHEQIH AVREEIERAR EMGACGENIF GSGRNFSVEV
361 FESPGGYICG EQSALIEAME DRRGQPRNRP PELTTNGLRD RPTVVNNVET LAWAPGIVLF
421 GGDKYEMGGW RLAADPKIKF GGRRLFSVSG DVARPGVYEV AVGLTLGELF TGDKYCGGIT
481 GPLRAVAASG PSGGLLPAKI PIDPKFDEKK RADAVAKIRE RSAQDADYMA WFLRTHIPMG
541 ATELDLLKVP LDLNFFRHMN GALRFPVEPM LGAAIAVYAG TVDLLDQAVN YTEFYRNESC
601 GKCIPCRLGS QKLVQIGQEL LTRRDSGKPV AGEEAERIKS DVKEITKTLQ LTSICGLGYV
661 APIPLATALS YFMEDTQKKP RG
//