LOCUS VTR92277.1 344 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana diguanylate cyclase : GGDEF domain
protein OS=Thiorhodococcus sp. AK35 GN=D779_3909 PE=4
SV=1: Response_reg: GGDEF protein.
ACCESSION LR593886-1578
PROTEIN_ID VTR92277.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_54370"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|W9V1J2|W9V1J2_9GAMM ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=GGDEF domain
protein OS=Thiorhodococcus sp. AK35 GN=D779_3909 PE=4 SV=1
; EVALUE=1e-48 ; Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G2E882|G2E882_9GAMM ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Response regulator
receiver modulated diguanylate cyclase OS=Thiorhodococcus
drewsii AZ1 GN=ThidrDRAFT_4496 PE=4 SV=1 ; EVALUE=1e-46 ;
Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G2DW73|G2DW73_9GAMM ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Response regulator
receiver modulated diguanylate cyclase OS=Thiorhodococcus
drewsii AZ1 GN=ThidrDRAFT_0262 PE=4 SV=1 ; EVALUE=9e-45 ;
Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|C0QEH9|C0QEH9_DESAH ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Signal transduction
family protein (GGDEF domain protein) OS=Desulfobacterium
autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
GN=HRM2_22230 PE=4 SV=1 ; EVALUE=1e-43 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A081SFY9|A0A081SFY9_9CHLB ;
ALN/Q_length_ratio=1.041 ; DESCRIPTION=Uncharacterized
protein OS=Chlorobium sp. GBChlB GN=HY22_08650 PE=4 SV=1 ;
EVALUE=5e-43 ; Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K9RTR0|K9RTR0_SYNP3 ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Diguanylate cyclase
(GGDEF) domain-containing protein OS=Synechococcus sp.
(strain ATCC 27167 / PCC 6312) GN=Syn6312_1532 PE=4 SV=1 ;
EVALUE=5e-40 ; Q/S_length_ratio=0.935"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A091BGI7|A0A091BGI7_9GAMM ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=Uncharacterized
protein OS=Arenimonas composti TR7-09 = DSM 18010
GN=P873_05715 PE=4 SV=1 ; EVALUE=6e-40 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A081BM91|A0A081BM91_9BACT ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Putative
diguanylate cyclase with GGDEF domain OS=bacterium UASB14
GN=U14_02752 PE=4 SV=1 ; EVALUE=1e-38 ;
Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0YM58|A0YM58_LYNSP ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Putative
diguanylate cyclase (GGDEF domain) OS=Lyngbya sp. (strain
PCC 8106) GN=L8106_06085 PE=4 SV=1 ; EVALUE=1e-36 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W6SQP2|W6SQP2_9CYAN ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Putative
two-component response regulator, modulated diguanylate
cyclase OS=Arthrospira sp. GN=ARTHRO_60986 PE=4 SV=1 ;
EVALUE=2e-36 ; Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K1W6V0|K1W6V0_ARTPT ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Response regulator
receiver modulated diguanylate cyclase OS=Arthrospira
platensis C1 GN=SPLC1_S200360 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B5W6J6|B5W6J6_ARTMA ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Response regulator
receiver modulated diguanylate cyclase OS=Arthrospira
maxima CS-328 GN=AmaxDRAFT_4395 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|H1WK28|H1WK28_9CYAN ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Putative
two-component response regulator, modulated diguanylate
cyclase OS=Arthrospira sp. PCC 8005 GN=ARTHRO_730034 PE=4
SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|E7C3V1|E7C3V1_9DELT ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=FOG: GGDEF domain
OS=uncultured myxobacterium HF0200_19H16 PE=4 SV=1 ;
EVALUE=7e-36 ; Q/S_length_ratio=0.930"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q3A5D4|Q3A5D4_PELCD ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Diguanylate cyclase
OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
GN=Pcar_1174 PE=4 SV=1 ; EVALUE=9e-36 ;
Q/S_length_ratio=0.798"
/note="Pfam_scan:hit_1 (10..120);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:2.4e-16; BITSCORE: 59.7"
/note="Pfam_scan:hit_2 (175..333); Pfam:PF00990.16:GGDEF;
Pfam_type:Domain;HMM_aln_Length:160; HMM_Length:161;
EVALUE:7e-34; BITSCORE: 116.7"
/note="GO_domain:GO:0007165"
BEGIN
1 MNVTRYKCSV LAVDDDPAIL AILTGQLGGD FDVITACSAE QARVTLSKRS VDIVLSDLQL
61 PDETGLSLLD WVRRTAPRTA RVLITGTARM QDAVDAINHS QVHRLVLKPW RSEDLLQTLR
121 AISRSLLLER SHEHLLDELR KLNLELEQRV QTRTQELEHA LGQLQQANLI LERMAATDPL
181 TGLANRRAVD AIARKELQRR TRLPGPIAVL WIDADHFGRV NKDYSQIAGD QVLVWLAGIL
241 QSSIRTIDTL GRVGGEEFMV LAPGTDVVGA EALAERLRTS VEAAQTVYLG HTIRMTVSIG
301 AAVAEDGTPA GYEQLREIAA QTLKEAKEAG RNRAIIRLIP PPAT
//