LOCUS VTR92259.1 291 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana family transcriptional regulator :
LysR substrate-binding protein OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_3534
PE=4 SV=1: HTH_1: LysR_substrate protein.
ACCESSION LR593886-1560
PROTEIN_ID VTR92259.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_54550"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SV61|D5SV61_PLAL2 ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=LysR
substrate-binding protein OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_3534 PE=4 SV=1 ; EVALUE=1e-73 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A4A1M3|A4A1M3_9PLAN ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=Hydrogen
peroxide-inducible genes activator OS=Blastopirellula
marina DSM 3645 GN=DSM3645_04745 PE=4 SV=1 ; EVALUE=2e-72
; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5T0I4|M5T0I4_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Hydrogen
peroxide-inducible gene activator OS=Rhodopirellula sp.
SWK7 GN=RRSWK_04783 PE=4 SV=1 ; EVALUE=3e-68 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5TY83|M5TY83_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Hydrogen
peroxide-inducible gene activator OS=Rhodopirellula
sallentina SM41 GN=RSSM_04598 PE=4 SV=1 ; EVALUE=9e-67 ;
Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G8NWD9|G8NWD9_GRAMM ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=Transcriptional
regulator, LysR family OS=Granulicella mallensis (strain
ATCC BAA-1857 / DSM 23137 / MP5ACTX8) GN=AciX8_3445 PE=4
SV=1 ; EVALUE=3e-66 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|S0EZR6|S0EZR6_CHTCT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Transcriptional
regulator OS=Chthonomonas calidirosea (strain DSM 23976 /
ICMP 18418 / T49) GN=CCALI_02207 PE=4 SV=1 ; EVALUE=4e-65
; Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1IRZ3|Q1IRZ3_KORVE ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Transcriptional
regulator, LysR family OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_1355 PE=4 SV=1 ; EVALUE=8e-65 ;
Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A9B4C8|A9B4C8_HERA2 ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Transcriptional
regulator, LysR family OS=Herpetosiphon aurantiacus
(strain ATCC 23779 / DSM 785) GN=Haur_0033 PE=4 SV=1 ;
EVALUE=7e-64 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F0SR93|F0SR93_PLABD ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Transcriptional
regulator, LysR family OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_4773 PE=4 SV=1 ; EVALUE=8e-63 ;
Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2AK04|M2AK04_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Hydrogen
peroxide-inducible genes activator OS=Rhodopirellula
europaea 6C GN=RE6C_01998 PE=4 SV=1 ; EVALUE=6e-62 ;
Q/S_length_ratio=0.848"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|D2R7I4|D2R7I4_PIRSD ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=Transcriptional
regulator, LysR family OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_2742 PE=4 SV=1 ;
EVALUE=1e-60 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C1A9Z7|C1A9Z7_GEMAT ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=LysR family
transcriptional regulator OS=Gemmatimonas aurantiaca
(strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)
GN=GAU_2553 PE=4 SV=1 ; EVALUE=1e-60 ;
Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A6C2C2|A6C2C2_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Hydrogen
peroxide-inducible genes activator OS=Planctomyces maris
DSM 8797 GN=PM8797T_03264 PE=4 SV=1 ; EVALUE=2e-60 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D5SWZ5|D5SWZ5_PLAL2 ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=LysR
substrate-binding protein OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_1664 PE=4 SV=1 ; EVALUE=1e-59 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B5JQV8|B5JQV8_9BACT ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=LysR substrate
binding domain protein OS=Verrucomicrobiae bacterium
DG1235 GN=VDG1235_542 PE=4 SV=1 ; EVALUE=1e-58 ;
Q/S_length_ratio=0.970"
/note="Pfam_scan:hit_1 (3..65); Pfam:PF00126.22:HTH_1;
Pfam_type:Domain;HMM_aln_Length:59; HMM_Length:60;
EVALUE:5.7e-20; BITSCORE: 70.8"
/note="Pfam_scan:hit_2 (87..291);
Pfam:PF03466.15:LysR_substrate;
Pfam_type:Family;HMM_aln_Length:201; HMM_Length:209;
EVALUE:8.7e-58; BITSCORE: 194.8"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MEIHQLKYFV AVAETGSFTR AAEREDVTQP TLSEQIMRLE SKKHGLNRRL FDRLGRKVVL
61 TDAGHELLGH AQRILAAVKE AERAVRDSAE GGSLRVGAIP TIAPFLLPST VTRFRKDHPT
121 VQLQLKEDLT ERLLADLLAG ELDVALMAMP IRDDRLHVEK LFAEPLVMAL PAKHRLAAKT
181 EVRLADVLEE PFILLDDMHC FGDQVLSLCH RGGLEPRVVC RGEQIVTLLA MVAAGQGVSI
241 VPEMAATADT SKQCVYRPLG KPIPTRTLCA VWHKQRFRPP SLRALVDVTK R
//