LOCUS VTR92247.1 161 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcription elongation factor : Transcription
elongation factor GreA OS=Rhodopirellula sp. SWK7 GN=greA
PE=3 SV=1: GreA_GreB_N: GreA_GreB protein.
ACCESSION LR593886-1548
PROTEIN_ID VTR92247.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_54670"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5RR85|M5RR85_9PLAN ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula maiorica SM1
GN=greA PE=3 SV=1 ; EVALUE=3e-57 ; Q/S_length_ratio=0.843"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5T8G9|M5T8G9_9PLAN ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula sp. SWK7 GN=greA
PE=3 SV=1 ; EVALUE=3e-57 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DJE1|L0DJE1_SINAD ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Transcription
elongation factor GreA OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=greA PE=3 SV=1 ; EVALUE=8e-57 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R6J1|E8R6J1_ISOPI ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Transcription
elongation factor GreA OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=greA PE=3 SV=1 ; EVALUE=9e-57
; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L7CCF4|L7CCF4_RHOBT ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula baltica SWK14
GN=greA PE=3 SV=1 ; EVALUE=1e-56 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_7 ; ACCESSION=Q7UVA0 ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula baltica (strain
SH1) GN=greA PE=3 SV=1 ; EVALUE=1e-56 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5S1Q4|M5S1Q4_9PLAN ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula europaea SH398
GN=greA PE=3 SV=1 ; EVALUE=1e-56 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5U773|M5U773_9PLAN ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula sallentina SM41
GN=greA PE=3 SV=1 ; EVALUE=5e-56 ; Q/S_length_ratio=0.861"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D2R891|D2R891_PIRSD ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Transcription
elongation factor GreA OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=greA PE=3 SV=1 ;
EVALUE=8e-56 ; Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2B6J8|M2B6J8_9PLAN ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula europaea 6C
GN=greA PE=3 SV=1 ; EVALUE=6e-55 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5C7I2|K5C7I2_RHOBT ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula baltica SH28
GN=greA PE=3 SV=1 ; EVALUE=6e-55 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2AWW1|F2AWW1_RHOBT ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Transcription
elongation factor GreA OS=Rhodopirellula baltica WH47
GN=greA PE=3 SV=1 ; EVALUE=6e-55 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A3ZZZ6|A3ZZZ6_9PLAN ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Transcription
elongation factor GreA OS=Blastopirellula marina DSM 3645
GN=greA PE=3 SV=1 ; EVALUE=4e-49 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_14 ; ACCESSION=B5YJG9 ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Transcription
elongation factor GreA OS=Thermodesulfovibrio yellowstonii
(strain ATCC 51303 / DSM 11347 / YP87) GN=greA PE=3 SV=1 ;
EVALUE=6e-48 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K2LWN2|K2LWN2_9PROT ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Transcription
elongation factor GreA OS=Thalassospira profundimaris
WP0211 GN=greA PE=3 SV=1 ; EVALUE=5e-46 ;
Q/S_length_ratio=1.025"
/note="Pfam_scan:hit_1 (1..76);
Pfam:PF03449.10:GreA_GreB_N;
Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:74;
EVALUE:4.8e-28; BITSCORE: 97.0"
/note="Pfam_scan:hit_2 (82..158);
Pfam:PF01272.14:GreA_GreB;
Pfam_type:Domain;HMM_aln_Length:74; HMM_Length:77;
EVALUE:3.2e-25; BITSCORE: 87.6"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0019899"
BEGIN
1 MTDDRIPMTR EGYDKLKVEL DRLRGAEMIE ITKRVATARE MGDLSENAEY HAAREDQGIL
61 QARINDLSDR LSRATIVDTA LLPKDTIAFG SKVKVMDLDV DEEETFELVG PGQENPDKGR
121 ILTTSPIGQG LIGRKKGDTV KIQVPSGTIK FKILEITTAN I
//