LOCUS VTR92224.1 437 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rnd family efflux transporter mfp subunit
: Efflux transporter, RND family, MFP subunit OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008
/ 290) GN=Plim_2293 PE=4 SV=1: HlyD protein.
ACCESSION LR593886-1525
PROTEIN_ID VTR92224.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_54900"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SNK5|D5SNK5_PLAL2 ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_2293 PE=4 SV=1 ; EVALUE=1e-83 ;
Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DLK6|L0DLK6_SINAD ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6016 PE=4 SV=1 ; EVALUE=2e-81 ;
Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DGV8|L0DGV8_SINAD ;
ALN/Q_length_ratio=0.789 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_3860 PE=4 SV=1 ; EVALUE=1e-72 ;
Q/S_length_ratio=1.076"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DRA3|L0DRA3_SINAD ;
ALN/Q_length_ratio=0.922 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7473 PE=4 SV=1 ; EVALUE=4e-72 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8R607|E8R607_ISOPI ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_3347 PE=4 SV=1 ;
EVALUE=2e-70 ; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|S7TUN4|S7TUN4_9DELT ;
ALN/Q_length_ratio=0.764 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Desulfovibrio sp. X2
GN=dsx2_3338 PE=4 SV=1 ; EVALUE=1e-65 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B8DN52|B8DN52_DESVM ;
ALN/Q_length_ratio=0.739 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Desulfovibrio vulgaris (strain
Miyazaki F / DSM 19637) GN=DvMF_0035 PE=4 SV=1 ;
EVALUE=3e-63 ; Q/S_length_ratio=1.082"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|U9R0J4|U9R0J4_PSEAI ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=RND efflux membrane
fusion protein OS=Pseudomonas aeruginosa CF27
GN=Q003_01428 PE=4 SV=1 ; EVALUE=1e-60 ;
Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K1BUD0|K1BUD0_PSEAI ;
ALN/Q_length_ratio=0.842 ;
DESCRIPTION=Resistance-Nodulation-Cell Division (RND)
efflux membrane fusion protein OS=Pseudomonas aeruginosa
ATCC 14886 GN=PABE171_1594 PE=4 SV=1 ; EVALUE=1e-60 ;
Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|E8R196|E8R196_ISOPI ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_0711 PE=4 SV=1 ;
EVALUE=5e-60 ; Q/S_length_ratio=0.903"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W8MF97|W8MF97_PSEAI ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Transporter
OS=Pseudomonas aeruginosa LES400 GN=T222_07850 PE=4 SV=1 ;
EVALUE=2e-56 ; Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|W8MNX3|W8MNX3_PSEAI ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Transporter
OS=Pseudomonas aeruginosa LESlike1 GN=T225_07845 PE=4 SV=1
; EVALUE=2e-56 ; Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|W8MFE7|W8MFE7_PSEAI ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Transporter
OS=Pseudomonas aeruginosa LESB65 GN=T224_07840 PE=4 SV=1 ;
EVALUE=2e-56 ; Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A068G2P8|A0A068G2P8_PSEAE ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Putative
Resistance-Nodulation-Cell Division (RND) efflux membrane
fusion protein OS=Pseudomonas aeruginosa PAO1H2O
GN=OU9_03562 PE=4 SV=1 ; EVALUE=2e-56 ;
Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|W8N5Z5|W8N5Z5_PSEAI ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Transporter
OS=Pseudomonas aeruginosa LESlike4 GN=T226_07845 PE=4 SV=1
; EVALUE=2e-56 ; Q/S_length_ratio=1.135"
/note="Pfam_scan:hit_1 (64..360); Pfam:PF00529.15:HlyD;
Pfam_type:Family;HMM_aln_Length:301; HMM_Length:305;
EVALUE:3.6e-25; BITSCORE: 88.9"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MQFLSRPIFT IALFVLGAGC AKPGGGPPGG GPPSGPIDVE VSTPVRGTVT DAEVFTGRTQ
61 AVMSADLRCR VSGYLEKVLF REGEDVELGA PLFQLELKPF ELAVRQARGT LEQQKAQLKF
121 NEANYTRMND TYKQGVGSVS DLQQALSSRD GSAAAVETAT AALETAQQNL AWATVRAPFA
181 GRISRRQVDP GNTVAADTTI LASLVQLDPL YAYFDIDERT VLRVRSRLAP NGATKSDQAL
241 PVSLGLSDER PEEFSRSGEL KFTDNKVDPN TGTLRVWGTF ANPKRDLHPG LFVRVRLQVG
301 APRSVLMVAE AALGSDQGRR YVYAVDAENR AARVPVEVGP RSNGLIAIEK GLTGDERVIV
361 RGLQNVRPKS EVVAKTVEMP RVKSAPTGAG PSPAGPGDVS AGASGPTTGA PAPAPSEGPM
421 SRPPAGSGGP KSGKSGR
//