LOCUS VTR92186.1 1247 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana histidine kinase : PAS domain S-box
OS=Microvirga lotononidis GN=MicloDRAFT_00068440 PE=4
SV=1: PAS_9: PAS_4: PAS_4: PAS_9: PAS_3: PAS_9: HisKA:
HATPase_c: Response_reg protein.
ACCESSION LR593886-1487
PROTEIN_ID VTR92186.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_55280"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|I4YQ70|I4YQ70_9RHIZ ;
ALN/Q_length_ratio=0.510 ; DESCRIPTION=PAS domain S-box
OS=Microvirga lotononidis GN=MicloDRAFT_00068440 PE=4 SV=1
; EVALUE=1e-145 ; Q/S_length_ratio=1.924"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|W1JZ94|W1JZ94_9BRAD ;
ALN/Q_length_ratio=0.499 ; DESCRIPTION=Two-component
hybrid sensor and regulator OS=Bradyrhizobium sp.
CCGE-LA001 GN=BCCGELA001_08209 PE=4 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.872"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|T0K1E6|T0K1E6_9SPHN ;
ALN/Q_length_ratio=0.414 ; DESCRIPTION=Uncharacterized
protein OS=Sphingobium ummariense RL-3 GN=M529_20160 PE=4
SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.257"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|H5Y6C5|H5Y6C5_9BRAD ;
ALN/Q_length_ratio=0.494 ; DESCRIPTION=PAS domain S-box
OS=Bradyrhizobium sp. WSM471 GN=Bra471DRAFT_00035 PE=4
SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.910"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q89T74|Q89T74_BRADU ;
ALN/Q_length_ratio=0.496 ; DESCRIPTION=Two-component
hybrid sensor and regulator OS=Bradyrhizobium
diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792
/ USDA 110) GN=bll2176 PE=4 SV=1 ; EVALUE=1e-140 ;
Q/S_length_ratio=1.967"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G7DB38|G7DB38_BRAJP ;
ALN/Q_length_ratio=0.496 ; DESCRIPTION=Two-component
hybrid sensor and regulator OS=Bradyrhizobium japonicum
USDA 6 GN=BJ6T_76760 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.878"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A0A3XI50|A0A0A3XI50_BRAJP ;
ALN/Q_length_ratio=0.496 ; DESCRIPTION=Histidine kinase
OS=Bradyrhizobium japonicum GN=MA20_40765 PE=4 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=1.878"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A099IMH5|A0A099IMH5_9BRAD ;
ALN/Q_length_ratio=0.496 ; DESCRIPTION=Putative Wide host
range virA protein OS=Bradyrhizobium diazoefficiens SEMIA
5080 GN=BJA5080_07744 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.895"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A023X8K2|A0A023X8K2_BRAJP ;
ALN/Q_length_ratio=0.496 ; DESCRIPTION=Wide host range
virA protein OS=Bradyrhizobium japonicum SEMIA 5079
GN=BJS_07514 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.895"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A069PMV7|A0A069PMV7_9BURK ;
ALN/Q_length_ratio=0.493 ; DESCRIPTION=Histidine kinase
OS=Burkholderia glathei GN=BG61_38995 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=1.567"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E1Y9P1|E1Y9P1_9DELT ;
ALN/Q_length_ratio=0.505 ; DESCRIPTION=Putative
uncharacterized protein OS=uncultured Desulfobacterium sp.
GN=N47_I07050 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A086MLN6|A0A086MLN6_9RHIZ ;
ALN/Q_length_ratio=0.507 ; DESCRIPTION=Histidine kinase
OS=Microvirga aerilata GN=JH26_07990 PE=4 SV=1 ;
EVALUE=1e-136 ; Q/S_length_ratio=1.924"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A060PIG6|A0A060PIG6_9BURK ;
ALN/Q_length_ratio=0.509 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Burkholderia sp. RPE67
GN=BRPE67_DCDS03580 PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=1.593"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|G8ML02|G8ML02_9BURK ;
ALN/Q_length_ratio=0.509 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Burkholderia sp. YI23
GN=BYI23_D001840 PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=1.593"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E8WJQ1|E8WJQ1_GEOS8 ;
ALN/Q_length_ratio=0.748 ; DESCRIPTION=Histidine kinase
OS=Geobacter sp. (strain M18) GN=GM18_2098 PE=4 SV=1 ;
EVALUE=1e-135 ; Q/S_length_ratio=0.987"
/note="Pfam_scan:hit_1 (19..140); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:95; HMM_Length:104;
EVALUE:1.9e-07; BITSCORE: 31.3"
/note="Pfam_scan:hit_2 (240..355); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:110;
EVALUE:2.5e-14; BITSCORE: 53.2"
/note="Pfam_scan:hit_3 (371..483); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:105; HMM_Length:110;
EVALUE:2.5e-17; BITSCORE: 62.8"
/note="Pfam_scan:hit_4 (503..606); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:102; HMM_Length:104;
EVALUE:1.2e-12; BITSCORE: 48.0"
/note="Pfam_scan:hit_5 (641..728); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:88; HMM_Length:91;
EVALUE:1.3e-16; BITSCORE: 60.4"
/note="Pfam_scan:hit_6 (757..861); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:102; HMM_Length:104;
EVALUE:2e-16; BITSCORE: 60.2"
/note="Pfam_scan:hit_7 (877..941); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:62; HMM_Length:68;
EVALUE:6.7e-07; BITSCORE: 29.2"
/note="Pfam_scan:hit_8 (984..1106);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:111;
EVALUE:1.4e-20; BITSCORE: 73.0"
/note="Pfam_scan:hit_9 (1128..1240);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:7.8e-17; BITSCORE: 61.3"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MVTASPISPD FRLLFESAPG LYLVLLPDSP KFTIAAVSEA YLRATMTERV AILGRGIFDV
61 FPDNPDDPGA TGVRNLRASL ERARDLRKPD AMAVQKYDVR RPADEGGAFE ERYWSPVNSP
121 VLGPDGRVAY IVHRVEDVTD FIYLRMRGIE HERRADDLIA RGQRLEAEVF QRAQQIQEAN
181 RQLREANEEL TRLKAELEER VRERTAQLTE ANDHLQAEVD ARLRSERELW RKREKLRVTL
241 ESIGDAVIAT DTRGLVTVLN PVAERLTGWA AADATGAPIS DLFRVVNQHT REPVENPVAR
301 VLADGENAEL ARGTVLIARD GTERPIDDSA APIRADDGTL LGAVLIFRDV TERCATEDAL
361 RRERTLLRTL IDALPIAIWT KDADARFVVS NPAHVELVRA PDEAAVTGKT GFDFHPPDLA
421 QEYHEDDLRV LRDGETVFNK EELVRDPEGR ERWHLVLKTP LRGTGGEIVG LVGASRNIQP
481 LKETENALRA SEAMLRGAFE DSNVPMVITA LDHRFLRANA AFARLFGYTQ TEMLNMSTAD
541 VTYPDDLPES YARRELLLAG ASHFVQHKRY VHKDGHILWG MTSVSLVRDE RGHPALYVGQ
601 VQDVTDRKLA EEELRESEWR FRAFFDATTA GMVELSPDAR ILNANQAFCR MIGYTEEELR
661 TRAVSDFVYP EDLNEVLRQY EHIGRAEGAS YEADRRYRRK DGSTLWARIS VVAARDATGR
721 PVRASAVIID ISDRRAAEES LRVSEERFRL VVDGVRDYAV FMLDPGGNVL TWNAGAERLF
781 GYPAAEIVGC HYSAFYRSED LDAGRAEEEL RLAVLRGRFE DEAWQLRKDG TRFWGGVVIT
841 VLHDGSGELR GFTKVVRDLT ERRRLEDQFR QAQKMDAIGR LAGGVAHDFN NLLTVINVSG
901 QLLMEQLPPR DPGRRLVKEI ATAGERATAL TAKLLAFSRK AIVEPRVLDL NEVITQSELL
961 LHRILGEDVR LATALDPNLR PVKVDPTHAE QIVINLAVNA RDAMPRGGQL TIETRNVTLR
1021 EEDAVTYPEL PCGRYVLMAV SDTGTGMTDE VKARIFEPFF TTKEIGKGTG LGLAMVYGAV
1081 KTHRGHIAVY SEVGVGTTFK ILLPVTDETR PGPRSGELRT VPRGAETILL VEDEETVRRL
1141 ARLALEMHGY TVLEASGGVE AVRTAVEHPT PIHMLVSDVV MPVMGGREVA EALRAQRPGV
1201 KVLFVSGYTD DAIVRHGIVE ATDAFLQKPF TPTSLARKVR AVLDGTE
//