LOCUS VTR92185.1 325 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana trna-dihydrouridine synthase c : tRNA-
dihydrouridine synthase OS=Fimbriimonas ginsengisoli Gsoil
348 GN=OP10G_1493 PE=3 SV=1: Dus protein.
ACCESSION LR593886-1486
PROTEIN_ID VTR92185.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_55290"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A068NN21|A0A068NN21_9BACT ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Fimbriimonas ginsengisoli Gsoil 348
GN=OP10G_1493 PE=3 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M6CDK5|M6CDK5_LEPME ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Leptospira meyeri serovar Semaranga str.
Veldrot Semarang 173 GN=LEP1GSC196_1042 PE=3 SV=1 ;
EVALUE=6e-83 ; Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A3QF60|A3QF60_SHELP ;
ALN/Q_length_ratio=0.858 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=Shew_2242 PE=3 SV=1 ; EVALUE=2e-81 ;
Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K2LXJ9|K2LXJ9_9PROT ;
ALN/Q_length_ratio=0.954 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Thalassospira profundimaris WP0211
GN=TH2_00325 PE=3 SV=1 ; EVALUE=2e-80 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B1KNJ3|B1KNJ3_SHEWM ;
ALN/Q_length_ratio=0.954 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Shewanella woodyi (strain ATCC 51908 / MS32)
GN=Swoo_1786 PE=3 SV=1 ; EVALUE=2e-80 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A1WAP0|A1WAP0_ACISJ ;
ALN/Q_length_ratio=0.889 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Acidovorax sp. (strain JS42) GN=Ajs_3192 PE=3
SV=1 ; EVALUE=5e-80 ; Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5BPX6|K5BPX6_LEPME ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Leptospira meyeri serovar Hardjo str. Went 5
GN=LEP1GSC017_2309 PE=3 SV=1 ; EVALUE=2e-79 ;
Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|C8Q0U6|C8Q0U6_9GAMM ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Enhydrobacter aerosaccus SK60
GN=ENHAE0001_1490 PE=3 SV=1 ; EVALUE=3e-79 ;
Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|N9DNS7|N9DNS7_9GAMM ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Acinetobacter bouvetii DSM 14964 = CIP 107468
GN=F941_02528 PE=3 SV=1 ; EVALUE=9e-79 ;
Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F5S5T2|F5S5T2_9NEIS ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Kingella kingae ATCC 23330 GN=dusC PE=3 SV=1 ;
EVALUE=1e-78 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|H8DW41|H8DW41_9NEIS ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Kingella kingae PYKK081 GN=KKB_02530 PE=3 SV=1
; EVALUE=1e-78 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F3LGE5|F3LGE5_9GAMM ;
ALN/Q_length_ratio=0.858 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=gamma proteobacterium IMCC1989 GN=IMCC1989_391
PE=3 SV=1 ; EVALUE=2e-78 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A009EZE4|A0A009EZE4_ACIBA ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Acinetobacter baumannii 348935 GN=J504_0177
PE=3 SV=1 ; EVALUE=4e-78 ; Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|V2U8W3|V2U8W3_9GAMM ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Acinetobacter oleivorans CIP 110421
GN=P254_02390 PE=3 SV=1 ; EVALUE=6e-78 ;
Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|N8VCR5|N8VCR5_9GAMM ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Acinetobacter sp. ANC 3789 GN=F975_00730 PE=3
SV=1 ; EVALUE=7e-78 ; Q/S_length_ratio=1.035"
/note="Pfam_scan:hit_1 (10..304); Pfam:PF01207.12:Dus;
Pfam_type:Family;HMM_aln_Length:224; HMM_Length:310;
EVALUE:7.5e-66; BITSCORE: 222.0"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0006399"
BEGIN
1 MLNADKPALV LAPMEGVTDA PMRAVQGDAG AFTYAVTEFL RVSHAVPPRH VFRDHVPELD
61 TDAKTLTGLP VQVQLLGGDA NLMAESAVRA HELGATAVDI NFGCPAPTVN RHDGGAALLR
121 HPKRIREIVT AVRAALPRAV PVSAKLRLGW DGIDAIHENA TMAAEGGASW ITIHGRTRVA
181 GYAPPIYWEP IGAVRERLGL PVVANGDIWT LDDFRRCRDA TGCRHFMLGR GALADPRLAH
241 RVAAELGLRP LSERASPEVP FDWPAQLRAL VEWSRRFDMM RSNKNVSRLK QWLRLAAQFG
301 SFTRFDAVKR ADNVEDLFAA LEAHN
//