LOCUS VTR92171.1 75 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana xre family transcriptional regulator
: DNA-binding helix-turn-helix protein OS=Oscillibacter
sp. KLE 1745 GN=HMPREF1546_01793 PE=4 SV=1: HTH_3 protein.
ACCESSION LR593886-1472
PROTEIN_ID VTR92171.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_55430"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|U2RYB7|U2RYB7_9FIRM ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=DNA-binding
helix-turn-helix protein OS=Oscillibacter sp. KLE 1728
GN=HMPREF1545_03603 PE=4 SV=1 ; EVALUE=4e-13 ;
Q/S_length_ratio=1.136"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|U2R5X6|U2R5X6_9FIRM ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=DNA-binding
helix-turn-helix protein OS=Oscillibacter sp. KLE 1745
GN=HMPREF1546_01793 PE=4 SV=1 ; EVALUE=4e-13 ;
Q/S_length_ratio=1.136"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E3Z386|E3Z386_LISIO ;
ALN/Q_length_ratio=0.827 ; DESCRIPTION=Toxin-antitoxin
system, antitoxin component, Xre family (Fragment)
OS=Listeria innocua FSL S4-378 GN=NT07LI_4137 PE=4 SV=1 ;
EVALUE=9e-12 ; Q/S_length_ratio=0.743"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|V4INA5|V4INA5_9DELT ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Uncharacterized
protein OS=uncultured Desulfofustis sp. PB-SRB1
GN=N839_10060 PE=4 SV=1 ; EVALUE=2e-11 ;
Q/S_length_ratio=0.362"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G2K8L1|G2K8L1_LISMN ;
ALN/Q_length_ratio=0.827 ; DESCRIPTION=Gp33 protein
OS=Listeria monocytogenes FSL R2-561 GN=LMKG_02842 PE=4
SV=1 ; EVALUE=3e-11 ; Q/S_length_ratio=0.466"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A083K2M6|A0A083K2M6_LISMN ;
ALN/Q_length_ratio=0.827 ; DESCRIPTION=Transcriptional
regulator OS=Listeria monocytogenes GN=HS64_08020 PE=4
SV=1 ; EVALUE=3e-11 ; Q/S_length_ratio=0.466"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E3ZPV0|E3ZPV0_LISSE ;
ALN/Q_length_ratio=0.827 ; DESCRIPTION=Gp33 OS=Listeria
seeligeri FSL N1-067 GN=NT03LS_1494 PE=4 SV=1 ;
EVALUE=3e-11 ; Q/S_length_ratio=0.466"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7M7A1|Q7M7A1_PHOLL ;
ALN/Q_length_ratio=0.880 ; DESCRIPTION=Complete genome;
segment 13/17 OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=plu3706 PE=4 SV=1 ; EVALUE=6e-11 ;
Q/S_length_ratio=0.625"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F7JBD7|F7JBD7_9FIRM ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=Uncharacterized
protein OS=Lachnospiraceae bacterium 1_1_57FAA
GN=HMPREF0990_00396 PE=4 SV=1 ; EVALUE=9e-11 ;
Q/S_length_ratio=0.735"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E5XD16|E5XD16_9FIRM ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=Transcriptional
regulator OS=Lachnospiraceae bacterium 8_1_57FAA
GN=HMPREF1026_00019 PE=4 SV=1 ; EVALUE=9e-11 ;
Q/S_length_ratio=0.735"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F5SHI3|F5SHI3_9BACL ;
ALN/Q_length_ratio=0.827 ; DESCRIPTION=XRE family
transcriptional regulator OS=Desmospora sp. 8437 GN=xre
PE=4 SV=1 ; EVALUE=1e-10 ; Q/S_length_ratio=0.694"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S8MET9|S8MET9_STRAG ;
ALN/Q_length_ratio=0.813 ; DESCRIPTION=XRE family
transcriptional regulator OS=Streptococcus agalactiae LMG
14608 GN=SAG0134_03080 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=0.641"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|S9B209|S9B209_STRAG ;
ALN/Q_length_ratio=0.813 ; DESCRIPTION=XRE family
transcriptional regulator OS=Streptococcus agalactiae FSL
S3-586 GN=SAG0014_04230 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=0.641"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B1I2S9|B1I2S9_DESAP ;
ALN/Q_length_ratio=0.880 ; DESCRIPTION=Helix-turn-helix
domain protein OS=Desulforudis audaxviator (strain MP104C)
GN=Daud_0776 PE=4 SV=1 ; EVALUE=4e-10 ;
Q/S_length_ratio=0.610"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|W4JIM5|W4JIM5_9LACO ;
ALN/Q_length_ratio=0.800 ; DESCRIPTION=Uncharacterized
protein OS=Lactobacillus crispatus 2029 GN=N580_00006505
PE=4 SV=1 ; EVALUE=4e-10 ; Q/S_length_ratio=0.974"
/note="Pfam_scan:hit_1 (7..61); Pfam:PF01381.17:HTH_3;
Pfam_type:Domain;HMM_aln_Length:54; HMM_Length:55;
EVALUE:1.7e-15; BITSCORE: 56.5"
/note="GO_domain:GO:0003677"
BEGIN
1 MTFGKNLKRL RAQRGWSQSA AARVAGIAYR SYQNWEGGSR EPRLDALKKL ADAFGVSADV
61 LLADPQPVNE VEVAK
//