LOCUS VTR92073.1 755 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana polynucleotide phosphorylase : Polyribonucleotide
nucleotidyltransferase OS=uncultured planctomycete GN=
pnp PE=3 SV=1: RNase_PH: RNase_PH_C: PNPase: RNase_PH:
RNase_PH_C: KH_1: S1 protein.
ACCESSION LR593886-1374
PROTEIN_ID VTR92073.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_56410"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6CAB9|A6CAB9_9PLAN ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Planctomyces maris DSM 8797
GN=pnp PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DE62|L0DE62_SINAD ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=pnp PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7CIH4|L7CIH4_RHOBT ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Rhodopirellula baltica SWK14
GN=pnp PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q1PVN2|Q1PVN2_9BACT ;
ALN/Q_length_ratio=0.919 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Candidatus Kuenenia
stuttgartiensis GN=pnp PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.071"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|E8QWZ8|E8QWZ8_ISOPI ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=pnp PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5TS50|M5TS50_9PLAN ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Rhodopirellula sp. SWK7 GN=pnp
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_8 ; ACCESSION=Q7UR95 ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Rhodopirellula baltica (strain
SH1) GN=pnp PE=3 SV=2 ; EVALUE=0.0 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F2B266|F2B266_RHOBT ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Rhodopirellula baltica WH47
GN=pnp PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.922"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5SB11|M5SB11_9PLAN ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Rhodopirellula europaea SH398
GN=pnp PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K5EE54|K5EE54_RHOBT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Rhodopirellula baltica SH28
GN=pnp PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.001"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SPK1|D5SPK1_PLAL2 ;
ALN/Q_length_ratio=0.914 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=pnp PE=3 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M2B5I5|M2B5I5_9PLAN ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Rhodopirellula europaea 6C
GN=pnp PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I3ILD1|I3ILD1_9PLAN ;
ALN/Q_length_ratio=0.913 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=planctomycete KSU-1 GN=pnp PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F0SLF4|F0SLF4_PLABD ;
ALN/Q_length_ratio=0.914 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=pnp PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SCZ5|H5SCZ5_9BACT ;
ALN/Q_length_ratio=0.917 ; DESCRIPTION=Polyribonucleotide
nucleotidyltransferase OS=uncultured planctomycete GN=pnp
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.983"
/note="Pfam_scan:hit_1 (13..144);
Pfam:PF01138.16:RNase_PH;
Pfam_type:Domain;HMM_aln_Length:129; HMM_Length:132;
EVALUE:6.9e-20; BITSCORE: 71.6"
/note="Pfam_scan:hit_2 (147..211);
Pfam:PF03725.10:RNase_PH_C;
Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:68;
EVALUE:4.1e-09; BITSCORE: 36.2"
/note="Pfam_scan:hit_3 (241..322); Pfam:PF03726.9:PNPase;
Pfam_type:Domain;HMM_aln_Length:75; HMM_Length:83;
EVALUE:1.2e-09; BITSCORE: 38.2"
/note="Pfam_scan:hit_4 (325..458);
Pfam:PF01138.16:RNase_PH;
Pfam_type:Domain;HMM_aln_Length:131; HMM_Length:132;
EVALUE:5.1e-19; BITSCORE: 68.8"
/note="Pfam_scan:hit_5 (461..531);
Pfam:PF03725.10:RNase_PH_C;
Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:68;
EVALUE:7.3e-10; BITSCORE: 38.6"
/note="Pfam_scan:hit_6 (557..614); Pfam:PF00013.24:KH_1;
Pfam_type:Domain;HMM_aln_Length:58; HMM_Length:60;
EVALUE:1.2e-17; BITSCORE: 63.3"
/note="Pfam_scan:hit_7 (620..692); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:74;
EVALUE:1.3e-16; BITSCORE: 60.4"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0034655"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:3.1.13"
/note="Enzyme_Code:EC:3.1.15"
/note="Enzyme_Code:EC:2.7.7.8"
BEGIN
1 MPVNPARVEC QFGGRTLTLE TGKFAKQAHG AVLVTYGETS VLVAAVEGTP IPGRDFFPLQ
61 VEYRERTYAA GKFPGGFIKR ETRPSTKETL TSRLIDRPSR PLFPTNYFNE VQIHCTVISS
121 DRENDADMLA LIGTSAALHV SHIPFLKPYG GLRLGRVNGE LIVLPTVTQM EESDLDLIVA
181 ATRDAVCMIE GFAREMPEQE VGDAIMEAHK QCAVLIDLIE RLRTEAGLQP KVLPPATPDN
241 PLAEELYAKY GTTYREKYLT KGKKERNAAL DELKDEVKKV YVPEGELNPK WTSSQVSSAL
301 GVLRERVFRE ITLGGTRIDG RAPKELRSIS GEVAVLSRTH GTAVFQRGET QALVVATLGT
361 VADEQKVDGL QDEYSKKFFL DYNFPPYSVG ECKPIRAPGR REIGHGMLAE RSLKAVIPPP
421 ARFPYTIRLV SEILESNGSS SMASVCGGTL ALMDAGVPIK RPVAGISVGL VMDKEEFTLL
481 TDIQGDEDHY GDMDFKVAGT QKGVTGIQLD IKVDGINEAI VRGALEQAKE ARLQILKVML
541 AALPAPRKEI SRWAPRLIQL KINPEMIGKL IGPGGKMIRA IQEETGAKID IEDDGTVSIA
601 SADAESVEAA RRMVEGLTAE VKVGAVYDGK VISLKEFGAF IEIAPGRDGL CHVSELDSGF
661 VQRPEDVVQV GDKVQVKVIA IDDQGRVKLS RKALLAPRED DGSGGGYGDR GGDRGDRGDR
721 GGDRGDRDRG DRGDRGGRGG DRGGRGGPRG GGRRD
//