LOCUS VTR92010.1 295 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana TolB protein OS=uncultured planctomycete
GN=HGMM_F22C11C09 PE=4 SV=1: PD40: PD40: PD40: PD40: PD40:
PD40 protein.
ACCESSION LR593886-1311
PROTEIN_ID VTR92010.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_57040"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SFQ8|H5SFQ8_9BACT ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=TolB protein
OS=uncultured planctomycete GN=HGMM_F22C11C09 PE=4 SV=1 ;
EVALUE=1e-94 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DS05|L0DS05_SINAD ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=Periplasmic
component of the Tol biopolymer transport system
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_7127 PE=4 SV=1 ;
EVALUE=3e-53 ; Q/S_length_ratio=0.949"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|X1L5K4|X1L5K4_9ZZZZ ;
ALN/Q_length_ratio=0.736 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S06H3_C05396 (Fragment) OS=marine
sediment metagenome GN=S06H3_11244 PE=4 SV=1 ;
EVALUE=4e-52 ; Q/S_length_ratio=1.317"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|C2Q875|C2Q875_BACCE ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=WD40-like Beta
Propeller OS=Bacillus cereus R309803 GN=bcere0009_8300
PE=4 SV=1 ; EVALUE=2e-51 ; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|X1AC07|X1AC07_9ZZZZ ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H4_S01127 OS=marine sediment
metagenome GN=S01H4_31317 PE=4 SV=1 ; EVALUE=5e-48 ;
Q/S_length_ratio=1.204"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|X0TB31|X0TB31_9ZZZZ ;
ALN/Q_length_ratio=0.678 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L00532 (Fragment) OS=marine
sediment metagenome GN=S01H1_04464 PE=4 SV=1 ;
EVALUE=1e-42 ; Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|X0Y415|X0Y415_9ZZZZ ;
ALN/Q_length_ratio=0.610 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S41189 (Fragment) OS=marine
sediment metagenome GN=S01H1_82540 PE=4 SV=1 ;
EVALUE=3e-42 ; Q/S_length_ratio=1.621"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|X1L8Y3|X1L8Y3_9ZZZZ ;
ALN/Q_length_ratio=0.783 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S06H3_C04139 (Fragment) OS=marine
sediment metagenome GN=S06H3_09403 PE=4 SV=1 ;
EVALUE=4e-40 ; Q/S_length_ratio=1.152"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D1JC26|D1JC26_9ARCH ;
ALN/Q_length_ratio=0.810 ; DESCRIPTION=Conserved
hypothetical secreted protein, containing WD40-like beta
propeller repeats OS=uncultured archaeon GN=BSM_31350 PE=4
SV=1 ; EVALUE=6e-39 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|W0RNZ5|W0RNZ5_9BACT ;
ALN/Q_length_ratio=0.831 ; DESCRIPTION=WD40-like beta
Propeller containing protein OS=Gemmatimonadetes bacterium
KBS708 GN=J421_4931 PE=4 SV=1 ; EVALUE=7e-38 ;
Q/S_length_ratio=0.459"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E7C5X4|E7C5X4_9BACT ;
ALN/Q_length_ratio=0.922 ; DESCRIPTION=Periplasmic
component of the Tol biopolymer transport system
OS=uncultured nuHF2 cluster bacterium HF0500_31B05 PE=4
SV=1 ; EVALUE=1e-37 ; Q/S_length_ratio=0.348"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A5UUK1|A5UUK1_ROSS1 ;
ALN/Q_length_ratio=0.681 ; DESCRIPTION=WD40 domain protein
beta Propeller OS=Roseiflexus sp. (strain RS-1)
GN=RoseRS_1915 PE=4 SV=1 ; EVALUE=5e-37 ;
Q/S_length_ratio=0.520"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A7NRG5|A7NRG5_ROSCS ;
ALN/Q_length_ratio=0.681 ; DESCRIPTION=WD40 domain protein
beta Propeller OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=Rcas_4129 PE=4 SV=1 ; EVALUE=7e-37 ;
Q/S_length_ratio=0.516"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D5MT79|D5MT79_9BACT ;
ALN/Q_length_ratio=0.861 ; DESCRIPTION=WD40-like beta
propeller protein OS=uncultured bacterium PE=4 SV=1 ;
EVALUE=1e-36 ; Q/S_length_ratio=0.899"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A081C0I3|A0A081C0I3_9BACT ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=WD40-like Beta
Propeller OS=bacterium UASB270 GN=U27_05061 PE=4 SV=1 ;
EVALUE=2e-36 ; Q/S_length_ratio=0.931"
/note="Pfam_scan:hit_1 (45..66); Pfam:PF07676.7:PD40;
Pfam_type:Repeat;HMM_aln_Length:23; HMM_Length:39;
EVALUE:0.0011; BITSCORE: 18.5"
/note="Pfam_scan:hit_2 (79..110); Pfam:PF07676.7:PD40;
Pfam_type:Repeat;HMM_aln_Length:12; HMM_Length:39;
EVALUE:0.1; BITSCORE: 12.2"
/note="Pfam_scan:hit_3 (124..159); Pfam:PF07676.7:PD40;
Pfam_type:Repeat;HMM_aln_Length:35; HMM_Length:39;
EVALUE:4e-08; BITSCORE: 32.7"
/note="Pfam_scan:hit_4 (167..203); Pfam:PF07676.7:PD40;
Pfam_type:Repeat;HMM_aln_Length:32; HMM_Length:39;
EVALUE:1.4e-05; BITSCORE: 24.6"
/note="Pfam_scan:hit_5 (211..247); Pfam:PF07676.7:PD40;
Pfam_type:Repeat;HMM_aln_Length:36; HMM_Length:39;
EVALUE:6.1e-07; BITSCORE: 28.9"
/note="Pfam_scan:hit_6 (255..291); Pfam:PF07676.7:PD40;
Pfam_type:Repeat;HMM_aln_Length:35; HMM_Length:39;
EVALUE:5.2e-09; BITSCORE: 35.5"
BEGIN
1 MKPLVPHSLV AALLCFPLIP LRAYGGENAP VRLTNDGSFK QNLQWSPDGK TLLFTRIHQG
61 KMALWVMPAE GGELKRLLPN HTEPHFDGHY SPDGKRIVYV YDKLEGTDGK LRINVCAADG
121 SDDQTLIPHK AFEESPRFSP NGKKVLWVST RNKNPDLFTV DADGKNETRL TNDPAYDLHP
181 AWNSDGTKIT FASGRSGKQK IHVMNADGSD QKRITDGEFL DAWPVWEPGG KRIAFASNRS
241 GNSDIWLMTE DGKELTNLTD HKAQDTAPVW HPKGKKLAFV STRDGGSDIY VIDIK
//