LOCUS VTR91962.1 528 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-directed dna polymerase : Reverse
transcriptase (RNA-dependent DNA polymerase) OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_4396 PE=4 SV=1: RVT_1 protein.
ACCESSION LR593886-1263
PROTEIN_ID VTR91962.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_57520"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DH52|L0DH52_SINAD ;
ALN/Q_length_ratio=0.896 ; DESCRIPTION=Reverse
transcriptase (RNA-dependent DNA polymerase)
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_4396 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.819"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B4D495|B4D495_9BACT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=RNA-directed DNA
polymerase (Reverse transcriptase) OS=Chthoniobacter
flavus Ellin428 GN=CfE428DRAFT_3733 PE=4 SV=1 ;
EVALUE=1e-172 ; Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A017TBZ3|A0A017TBZ3_9DELT ;
ALN/Q_length_ratio=0.847 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Chondromyces apiculatus DSM
436 GN=CAP_1962 PE=4 SV=1 ; EVALUE=1e-154 ;
Q/S_length_ratio=0.941"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5S214|M5S214_9PLAN ;
ALN/Q_length_ratio=0.913 ; DESCRIPTION=RNA-directed DNA
polymerase (Reverse transcriptase) OS=Rhodopirellula
europaea SH398 GN=RESH_03803 PE=4 SV=1 ; EVALUE=1e-152 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A9GA89|A9GA89_SORC5 ;
ALN/Q_length_ratio=0.879 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Sorangium cellulosum (strain So ce56)
GN=sce2673 PE=4 SV=1 ; EVALUE=1e-144 ;
Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|S4XQW5|S4XQW5_SORCE ;
ALN/Q_length_ratio=0.879 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Sorangium cellulosum So0157-2
GN=SCE1572_49095 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5T8E0|M5T8E0_9PLAN ;
ALN/Q_length_ratio=0.676 ; DESCRIPTION=RNA-directed DNA
polymerase (Reverse transcriptase) OS=Rhodopirellula sp.
SWK7 GN=RRSWK_02148 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=1.228"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A085WN52|A0A085WN52_9DELT ;
ALN/Q_length_ratio=0.847 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Hyalangium minutum
GN=DB31_7017 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A085XHS4|A0A085XHS4_9DELT ;
ALN/Q_length_ratio=0.847 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Enhygromyxa salina
GN=DB30_1803 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F4XSJ7|F4XSJ7_9CYAN ;
ALN/Q_length_ratio=0.708 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Moorea producens 3L GN=LYNGBM3L_18420 PE=4
SV=1 ; EVALUE=1e-105 ; Q/S_length_ratio=1.123"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|W4L7B2|W4L7B2_9DELT ;
ALN/Q_length_ratio=0.661 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_40060 PE=4 SV=1 ; EVALUE=1e-105 ;
Q/S_length_ratio=1.131"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C7PE56|C7PE56_CHIPD ;
ALN/Q_length_ratio=0.765 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Chitinophaga pinensis (strain ATCC 43595 /
DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_4096 PE=4 SV=1 ;
EVALUE=1e-105 ; Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|T1W924|T1W924_9ZZZZ ;
ALN/Q_length_ratio=0.703 ; DESCRIPTION=Reverse
transcriptase/RNA-dependent DNA polymerase OS=uncultured
organism PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=0.845"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A098XE14|A0A098XE14_9CYAN ;
ALN/Q_length_ratio=0.839 ; DESCRIPTION=DNA polymerase
OS=Tolypothrix bouteillei VB521301 GN=DA73_31160 PE=4 SV=1
; EVALUE=1e-102 ; Q/S_length_ratio=1.126"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K9REZ6|K9REZ6_9CYAN ;
ALN/Q_length_ratio=0.867 ; DESCRIPTION=Membrane-bound
metallopeptidase OS=Rivularia sp. PCC 7116 GN=Riv7116_3194
PE=4 SV=1 ; EVALUE=1e-102 ; Q/S_length_ratio=1.123"
/note="Pfam_scan:hit_1 (248..461); Pfam:PF00078.22:RVT_1;
Pfam_type:Family;HMM_aln_Length:212; HMM_Length:214;
EVALUE:2.8e-29; BITSCORE: 102.0"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="Enzyme_Code:EC:2.7.7.49"
BEGIN
1 MSMFDWIFRR KRDTTPTPES APPSVPSTPD PRGQQPAPKA EPQAETPADP YSASEFLPIS
61 RQEIVDAAQK HGRLLATAFQ FGRQSIIPPV SDPRTEIIDR ALVTHGLLSP EELNEIHRVG
121 EEYEKVRPTE MGIAAAAGLA GNAAVQAYRE AKEREKARKK AESAARKKDR VEAVRRRRAT
181 DIIFLGRGVS GRLHLRMSDE VKLTALGLPV LHAPADVAKA LGLTIKQLRW LGFHTEVATR
241 THYVKFQVPK KSGGMRTLAA PHKKLKTAQH WILENVVNKL PVTEAAHGFV AGRGIVTNAN
301 PHVNKAVVVN LDLSDFFPSI AFFRVRAVYE RYGYSGSVAT VLALLCTECP RAAVTYAGTK
361 YEAATGPRGL PQGAPTSPGL SNQVARKLDK RLLGVATKLG VTYTRYADDL TFSGNADLAG
421 KIGWLLAKVR NIAREEGFAV NEKKTRVMRR SAAQVVTGVV VNDKPSVSRD EIRRLRAILH
481 RAKSEGLDAQ NREGRENFRE WLAGKIAFVN MVRPDAGAKL KAALDALR
//