LOCUS VTR91925.1 125 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-binding protein : RNP-1 like RNA-
binding protein OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1587 PE=4
SV=1: RRM_1 protein.
ACCESSION LR593886-1226
PROTEIN_ID VTR91925.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_57890"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SWS0|D5SWS0_PLAL2 ;
ALN/Q_length_ratio=0.648 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1587 PE=4
SV=1 ; EVALUE=5e-30 ; Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M2AZR6|M2AZR6_9PLAN ;
ALN/Q_length_ratio=0.688 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domain protein
OS=Rhodopirellula europaea 6C GN=RE6C_04245 PE=4 SV=1 ;
EVALUE=2e-28 ; Q/S_length_ratio=0.641"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K5C9M0|K5C9M0_RHOBT ;
ALN/Q_length_ratio=0.688 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domain protein
OS=Rhodopirellula baltica SH28 GN=RBSH_04923 PE=4 SV=1 ;
EVALUE=2e-28 ; Q/S_length_ratio=0.661"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5S3Z3|M5S3Z3_9PLAN ;
ALN/Q_length_ratio=0.688 ; DESCRIPTION=RNA recognition
motif, RNP-1 domain protein OS=Rhodopirellula europaea
SH398 GN=RESH_03139 PE=4 SV=1 ; EVALUE=2e-28 ;
Q/S_length_ratio=0.641"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q7UEZ2|Q7UEZ2_RHOBA ;
ALN/Q_length_ratio=0.688 ; DESCRIPTION=RNA-binding protein
OS=Rhodopirellula baltica (strain SH1) GN=grp PE=4 SV=1 ;
EVALUE=2e-28 ; Q/S_length_ratio=0.607"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F2AWM0|F2AWM0_RHOBT ;
ALN/Q_length_ratio=0.688 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domains OS=Rhodopirellula
baltica WH47 GN=RBWH47_00759 PE=4 SV=1 ; EVALUE=2e-28 ;
Q/S_length_ratio=0.641"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CIW2|L7CIW2_RHOBT ;
ALN/Q_length_ratio=0.688 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domain protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_02084 PE=4 SV=1 ;
EVALUE=2e-28 ; Q/S_length_ratio=0.638"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E8R1A5|E8R1A5_ISOPI ;
ALN/Q_length_ratio=0.640 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_0720 PE=4 SV=1 ;
EVALUE=3e-28 ; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L0DDX1|L0DDX1_SINAD ;
ALN/Q_length_ratio=0.656 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_3164 PE=4 SV=1 ; EVALUE=4e-26 ;
Q/S_length_ratio=0.874"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5TAI8|M5TAI8_9PLAN ;
ALN/Q_length_ratio=0.672 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Rhodopirellula sp. SWK7
GN=RRSWK_04730 PE=4 SV=1 ; EVALUE=1e-25 ;
Q/S_length_ratio=0.962"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5UB20|M5UB20_9PLAN ;
ALN/Q_length_ratio=0.672 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Rhodopirellula sallentina SM41
GN=RSSM_05402 PE=4 SV=1 ; EVALUE=4e-25 ;
Q/S_length_ratio=0.906"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0LED5|A0LED5_SYNFM ;
ALN/Q_length_ratio=0.664 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=Sfum_0084 PE=4 SV=1 ;
EVALUE=2e-24 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q02AB7|Q02AB7_SOLUE ;
ALN/Q_length_ratio=0.632 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Solibacter usitatus (strain
Ellin6076) GN=Acid_1007 PE=4 SV=1 ; EVALUE=3e-24 ;
Q/S_length_ratio=0.947"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I4B1V1|I4B1V1_TURPD ;
ALN/Q_length_ratio=0.648 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Turneriella parva (strain ATCC
BAA-1111 / DSM 21527 / NCTC 11395 / H) GN=Turpa_0606 PE=4
SV=1 ; EVALUE=6e-24 ; Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B9XL48|B9XL48_PEDPL ;
ALN/Q_length_ratio=0.664 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Pedosphaera parvula (strain
Ellin514) GN=Cflav_PD2243 PE=4 SV=1 ; EVALUE=2e-23 ;
Q/S_length_ratio=0.984"
/note="Pfam_scan:hit_1 (5..73); Pfam:PF00076.17:RRM_1;
Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:70;
EVALUE:6.2e-20; BITSCORE: 70.6"
/note="GO_domain:GO:0003674"
BEGIN
1 MATNLYVGNM SFSTTEDQLR EVFSQYGTVT KVQLITDRET GRPRGFAFVE MSNGGDQAIA
61 ALNGTQLDGR SLTVNEAKPR EGRSGGGGGG GYGGGGGGYG GGRGGSGGRG GSGGGGYGGG
121 GGRRY
//