LOCUS VTR91894.1 860 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana atp-dependent helicase : ATP-dependent
helicase HrpB OS=Pirellula staleyi (strain ATCC 27377
/ DSM 6068 / ICPB 4128) GN=Psta_3120 PE=4 SV=1: DEAD:
Helicase_C: HA2: HrpB_C protein.
ACCESSION LR593886-1195
PROTEIN_ID VTR91894.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_58200"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DPH6|L0DPH6_SINAD ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6510
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A085W2Z3|A0A085W2Z3_9DELT ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Hyalangium minutum GN=DB31_4162 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q7UT94|Q7UT94_RHOBA ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=ATP-dependent
helicase OS=Rhodopirellula baltica (strain SH1) GN=hrpB
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q08SY7|Q08SY7_STIAD ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Stigmatella aurantiaca (strain DW4/3-1)
GN=hrpB PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|S9NU47|S9NU47_9DELT ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Cystobacter fuscus DSM 2262
GN=D187_009296 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7U9V3|L7U9V3_MYXSD ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Myxococcus stipitatus (strain DSM 14675 /
JCM 12634 / Mx s8) GN=MYSTI_03517 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L7CQ90|L7CQ90_RHOBT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Rhodopirellula baltica SWK14
GN=RBSWK_00914 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q1D7W0|Q1D7W0_MYXXD ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Myxococcus xanthus (strain DK 1622)
GN=hrpB PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F8CLH6|F8CLH6_MYXFH ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Myxococcus fulvus (strain ATCC BAA-855 /
HW-1) GN=LILAB_23025 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A085X1T7|A0A085X1T7_9DELT ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Enhygromyxa salina GN=DB30_7661 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2ARU0|F2ARU0_RHOBT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Rhodopirellula baltica WH47
GN=RBWH47_04354 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q846Q2|Q846Q2_MYXXA ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=ATP-dependent RNA
helicase OS=Myxococcus xanthus PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A084SXS6|A0A084SXS6_9DELT ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=ATP-dependent
helicase OS=Cystobacter violaceus Cb vi76 GN=Q664_10355
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2QWI1|D2QWI1_PIRSD ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=ATP-dependent
helicase HrpB OS=Pirellula staleyi (strain ATCC 27377 /
DSM 6068 / ICPB 4128) GN=Psta_3120 PE=4 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|W4M4T3|W4M4T3_9DELT ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Helicase
OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_23550 PE=4
SV=1 ; EVALUE=1e-180 ; Q/S_length_ratio=1.005"
/note="Pfam_scan:hit_1 (9..169); Pfam:PF00270.24:DEAD;
Pfam_type:Domain;HMM_aln_Length:150; HMM_Length:169;
EVALUE:9.4e-10; BITSCORE: 38.2"
/note="Pfam_scan:hit_2 (237..330);
Pfam:PF00271.26:Helicase_C;
Pfam_type:Family;HMM_aln_Length:75; HMM_Length:78;
EVALUE:4.1e-14; BITSCORE: 52.2"
/note="Pfam_scan:hit_3 (390..492); Pfam:PF04408.18:HA2;
Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:102;
EVALUE:1.7e-14; BITSCORE: 53.6"
/note="Pfam_scan:hit_4 (715..847); Pfam:PF08482.5:HrpB_C;
Pfam_type:Family;HMM_aln_Length:130; HMM_Length:133;
EVALUE:3.1e-46; BITSCORE: 156.7"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0004386"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MPKDTLPIDD ALPELLAALR ANGAAVLRAP TGAGKTTRVP PAVVESGLAG TGLVLMLEPR
61 RVAARAAARR MAIEHGAPIG DVFGYQVRFD RKASARTRVL VVTPGVLLRR LIDDPFLDGI
121 ACVVFDEFHE RGLEADLALG MVRLIRENVR PELKVIVMSA TVDPLAVSTY FGGCPVVDSA
181 GRTFPVDVKY RPRRTDTPVP LAVADAVRDV LAERDGDVLA FLPGLREIGQ AADHLETFAR
241 EQGIAVLPLH GDLPPEQQDR ALQQLDQRKI VLATNVAETS VTVAGVTAVV DSGLARQMEF
301 APDVGMDRLR LVPISRASAD QRAGRAGRTA PGVCVRLWDE PSHRGRPEQT VPEIKRVDLC
361 GAALQLAALG ERDVRKFPWL DAPTEEAVQQ ALRLLEQLEL LNADGLTPLG EAAAALPVHP
421 RLGRLLLEGQ RLGCAPRAAL AAALLSERDP FLREFDSGPP VRRAPPTVSD VLDRVEALEA
481 FERGGRLDGP LGRLHRGGAH GVLEVRNQLA RLIRPNPPTP FPKKEGGFEA PPFLGEGLGR
541 GSDDALLRCV FTAYPDRLAR RREPGSTKAL TVGGRGVRLA QTSGVSEPEL FVCVDVDAGG
601 ADSFVRLASG VEREWLPSDR IAIRIEVTFD DKTERLAARK VTRFDDLVLD ETNAHIADES
661 EAASVLAAAA AERLEKVLPP PDSAAGAFRT RVRCLRAWVP ELELPAFEAA DLHDALETLC
721 RNRRSLADVR NGAWLEFLKA QLTYQQLQTV ESEAPERIEV PSGSHIQIEY AEGRPPVLAA
781 RIQEMFGLTE TPRVARGRVK VLLHLLAPNY RPQQVTDDLA SFWKNGYPIV RKELRARYPK
841 HSWPDDPLTA EAIRGARKRT
//