LOCUS VTR91837.1 2195 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana general secretion pathway protein d
: General secretion pathway protein D (Precursor) OS=Planctomyces
maris DSM 8797 GN=PM8797T_14279 PE=3 SV=1: Secretin_N:
Secretin_N: Secretin_N: Secretin_N: Secretin_N: Secretin_N:
Secretin protein.
ACCESSION LR593886-1138
PROTEIN_ID VTR91837.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_58770"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A6CD16|A6CD16_9PLAN ;
ALN/Q_length_ratio=0.365 ; DESCRIPTION=General secretion
pathway protein D (Precursor) OS=Planctomyces maris DSM
8797 GN=PM8797T_14279 PE=3 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=1.679"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A4A016|A4A016_9PLAN ;
ALN/Q_length_ratio=0.277 ; DESCRIPTION=General secretion
pathway protein D (Precursor) OS=Blastopirellula marina
DSM 3645 GN=DSM3645_27331 PE=3 SV=1 ; EVALUE=4e-98 ;
Q/S_length_ratio=1.831"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0SJH6|F0SJH6_PLABD ;
ALN/Q_length_ratio=0.280 ; DESCRIPTION=Type II and III
secretion system protein OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_3191 PE=3 SV=1 ; EVALUE=4e-92 ;
Q/S_length_ratio=1.669"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5RQL8|M5RQL8_9PLAN ;
ALN/Q_length_ratio=0.364 ; DESCRIPTION=General secretion
pathway protein D OS=Rhodopirellula maiorica SM1
GN=RMSM_01432 PE=3 SV=1 ; EVALUE=1e-82 ;
Q/S_length_ratio=1.735"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TB48|M5TB48_9PLAN ;
ALN/Q_length_ratio=0.309 ; DESCRIPTION=General secretion
pathway protein D OS=Rhodopirellula sp. SWK7
GN=RRSWK_00962 PE=3 SV=1 ; EVALUE=3e-79 ;
Q/S_length_ratio=1.746"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M2B6R2|M2B6R2_9PLAN ;
ALN/Q_length_ratio=0.314 ; DESCRIPTION=Type II and III
secretion system protein OS=Rhodopirellula europaea 6C
GN=RE6C_01365 PE=3 SV=1 ; EVALUE=2e-78 ;
Q/S_length_ratio=1.737"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5TVR1|M5TVR1_9PLAN ;
ALN/Q_length_ratio=0.318 ; DESCRIPTION=General secretion
pathway protein D OS=Rhodopirellula sallentina SM41
GN=RSSM_05318 PE=3 SV=1 ; EVALUE=4e-78 ;
Q/S_length_ratio=1.774"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7CK83|L7CK83_RHOBT ;
ALN/Q_length_ratio=0.251 ; DESCRIPTION=General secretion
pathway protein D OS=Rhodopirellula baltica SWK14
GN=RBSWK_01405 PE=3 SV=1 ; EVALUE=6e-78 ;
Q/S_length_ratio=1.819"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F2AXU2|F2AXU2_RHOBT ;
ALN/Q_length_ratio=0.299 ; DESCRIPTION=General secretion
pathway protein D OS=Rhodopirellula baltica WH47
GN=RBWH47_03422 PE=3 SV=1 ; EVALUE=9e-78 ;
Q/S_length_ratio=1.741"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5E8C5|K5E8C5_RHOBT ;
ALN/Q_length_ratio=0.253 ; DESCRIPTION=General secretion
pathway protein D OS=Rhodopirellula baltica SH28
GN=RBSH_02599 PE=3 SV=1 ; EVALUE=3e-77 ;
Q/S_length_ratio=1.735"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q7UX59|Q7UX59_RHOBA ;
ALN/Q_length_ratio=0.253 ; DESCRIPTION=General secretion
pathway protein D [Precursor] OS=Rhodopirellula baltica
(strain SH1) GN=gspD PE=3 SV=1 ; EVALUE=1e-76 ;
Q/S_length_ratio=1.735"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|X1IYN4|X1IYN4_9ZZZZ ;
ALN/Q_length_ratio=0.111 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_S13369 (Fragment) OS=marine
sediment metagenome GN=S03H2_47370 PE=4 SV=1 ;
EVALUE=4e-47 ; Q/S_length_ratio=8.252"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|H3M040|H3M040_KLEOX ;
ALN/Q_length_ratio=0.169 ; DESCRIPTION=General secretion
pathway protein D OS=Klebsiella oxytoca 10-5245
GN=HMPREF9689_00328 PE=3 SV=1 ; EVALUE=3e-40 ;
Q/S_length_ratio=3.326"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|V3Q7U8|V3Q7U8_KLEOX ;
ALN/Q_length_ratio=0.169 ; DESCRIPTION=General secretion
pathway protein D OS=Klebsiella oxytoca MGH 28
GN=L374_01421 PE=3 SV=1 ; EVALUE=3e-40 ;
Q/S_length_ratio=3.326"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A022HBR0|A0A022HBR0_KLEOX ;
ALN/Q_length_ratio=0.169 ; DESCRIPTION=General secretion
pathway protein D OS=Klebsiella oxytoca G54 GN=T655_03621
PE=3 SV=1 ; EVALUE=3e-40 ; Q/S_length_ratio=3.326"
/note="Pfam_scan:hit_1 (247..367);
Pfam:PF03958.12:Secretin_N;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:82;
EVALUE:5.5e-08; BITSCORE: 32.8"
/note="Pfam_scan:hit_2 (662..754);
Pfam:PF03958.12:Secretin_N;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:82;
EVALUE:2.9e-07; BITSCORE: 30.5"
/note="Pfam_scan:hit_3 (768..865);
Pfam:PF03958.12:Secretin_N;
Pfam_type:Domain;HMM_aln_Length:75; HMM_Length:82;
EVALUE:4.4e-10; BITSCORE: 39.6"
/note="Pfam_scan:hit_4 (1122..1220);
Pfam:PF03958.12:Secretin_N;
Pfam_type:Domain;HMM_aln_Length:79; HMM_Length:82;
EVALUE:2.2e-05; BITSCORE: 24.5"
/note="Pfam_scan:hit_5 (1222..1292);
Pfam:PF03958.12:Secretin_N;
Pfam_type:Domain;HMM_aln_Length:75; HMM_Length:82;
EVALUE:1.9e-06; BITSCORE: 27.9"
/note="Pfam_scan:hit_6 (1575..1655);
Pfam:PF03958.12:Secretin_N;
Pfam_type:Domain;HMM_aln_Length:80; HMM_Length:82;
EVALUE:2e-10; BITSCORE: 40.6"
/note="Pfam_scan:hit_7 (1746..1910);
Pfam:PF00263.16:Secretin;
Pfam_type:Family;HMM_aln_Length:164; HMM_Length:165;
EVALUE:4.9e-46; BITSCORE: 156.1"
/note="GO_domain:GO:0006810"
BEGIN
1 MGQRRGSQAR AVPFWKLLKL RKWLPGVLAA AAGLTGPVDR ALAQPVPMSV PGAPGAVAPV
61 APSAPAIPTA PAKTVSIHFE KARWEDVLDW YSKETGLTLI TTVHPTGTVN IKPGKDRKFT
121 IGEVTDLINE AMMQQKFILI RRHMTFFIQP SDEKIDPTLL PRVTLSELPE RGRTEIVQVV
181 VPVEGMVVED ATEELKKLLT PFGTMVPLTK PNALLIQDTV GNIARIQKTL DDIVDKTKGA
241 DSLNHVCEYR RAQEIAEVLK TLMSDATTRI DITGTQQMPQ TFDPRGGGGW GGGSGWGGGD
301 PRWSGGPGGS SDPRRGPGGQ QPVGSGRVKT VQIAVDAKRN AILVTAPQDK IGLAEKLIKE
361 QDKPVKPGDG KIVVGEPVLK TYTVQAGAAD LAKNIQAKFP WLQAIGLPAQ NQILVVASPA
421 DHKDVENYLG LGGGPGTAAT DLTFIPLSAL DPGEAAAIVT KIMPTPAAGG PTVEPVKTGN
481 VGLMVKGSSA QILEIKKILI LNGETSIGTD TMPSGPAPTS RTITLGGNTN AAVVAELLGR
541 AMEGMGKKVI INDPLNPKPP VLRPPAGGLP PGSEPAPRQP VPVQPAPTRP PTLGTRDQLP
601 GRDFLISAQI SDPEKKDDKP IIITVTGGKL LIQSDDTKAL EVLSQLARYI TTEGAKADEN
661 LFKVIRLRSV SAEDAARELT EIFNGPQQQQ QGGNRGPGGF NPLALFGGLG GGANQTPPAP
721 GRVRVVAERS SNSVVVVKAS PLDLVLIEKL LEGAIDGGPN DSAVVMKTYR IPVKNADATE
781 VARQIRELYR SAMLPSGGQA GGLPVFNPFA AAALGGGGGG QQQQQRPPAL SLTVDDRSNS
841 ITVVCTEPMY QDIREFVGQL DSATINTTET VKLVQLKGID PNVVQQAINA MQGRDTRQQQ
901 QGNRGGFGGG GPGGFGGGGQ GGFGGGGPGG FGGGGFGGGG AGMGGGGGTR GGGGGATGGG
961 GTRGGGGGGA RPGGGRQASL GTTEGPLNFD YRGTDAPSAV SKIYDPMIDT PDFGYNRPAK
1021 QSNDVVQVGA RQPEPPVIPG GALPQTMPQP PVPPGYERPG TPPGTGVAGG PTESAPRGTV
1081 TAIPITGFDA IVIRAQDAQD LELVLQLIDL LQRQGKEVQP KVEVVRLEHG DCNYIADAFN
1141 ALLTRVQIGQ NGNYVPAART GVTSPGFGNQ GALGGAGAAG SQNVGALALP RFNAVLLVAP
1201 EARFEDVKKE LKRLDQPSGA PLKAFHLTNA SAQIVAQQLQ NFWNTRYPGE SLQRNQFRVT
1261 FDIASNTVFI QGSPSDLKDA AELISLMDTS VSKAVNDMRV FRLKNALSDE LGQVLSQALT
1321 ANVLSQQPQQ QFTSPLAQTA GGQTAFGGFT TQQQQGQQGL QNQVGQQLGQ QNQIGQGNQG
1381 GLNGAQQVQQ INALIPTIGT GGAGGLHTKS TAIRFYSAKD GKTYETGFLS DVHIVSNARI
1441 NALVIAAPTE TMKVIEQLVE SLDTVAAARS YVNVFQLSKG ADANLTANLI AQLFTGQGRQ
1501 ANTNIGTQGL GNTNQARPLL VLTGNPADGA SLIDLRLSVD DRTNSLIVAG SLNDLDTIRA
1561 IIARLEGTDA QARYHEVVKL RNAAAADVAT ALQTFFTNSL AAYTGAQFTS VYQQLQRNVV
1621 VIAEPVSNTV LIAATPQYFG EIKRIIDKID SQPPQVVIQV TIAEVQLNNT EEAGVELGLQ
1681 TPVLFNRGTG LNFNTTAALP NVAVSEGTVG FQGLGNLGVG RTSPTQGVGG FVFSASSDTF
1741 SLLVRALKAQ GRVDVLSRPQ VQVADNQTGY MNVGQKFPVA TGSTITNGLS QQGINYVDIG
1801 ITLQVTPRVN PDGKVLMRVE PTVSSVQPGS VSVGGIQAAV FNQQTVQTTV LASDGETIVL
1861 GGLISRQETR NETGIPYMKD IPYVGSLFRY RTHTLQRREI LVIMTPHIVR NEYDQARILA
1921 EESAKMKWCL PEVAAAHTHG MEVMGPASQG ARPVPVGGPQ GGAQQPAPGP AYFGTFNPIP
1981 LDGTSAYQPG VAPGTLQPGT LQPAYIPPSA QPGAVQPNHL MPPGGAAILP MAPQSMQSGT
2041 PMPGQPIPGT GTLPPLPGAP GAMAPQLWPT QPTAGVMPIS ATQPTFAPPA STQAVVQPGF
2101 VQPTTAPVYP QSIPVQPAPV GYTMQVPGAP VQPVAPPGAP NTAGRGFTMV GGAPAPAAPT
2161 QPQPATGKDT PPADKKPLPK TTEGTQWGTG NNIFR
//