LOCUS VTR91778.1 250 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana trna pseudouridine synthase a : tRNA
pseudouridine synthase A OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=truA PE=3 SV=1: PseudoU_synth_1: PseudoU_synth_1 protein.
ACCESSION LR593886-1079
PROTEIN_ID VTR91778.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_59360"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DDA4|L0DDA4_SINAD ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=truA PE=3
SV=1 ; EVALUE=1e-92 ; Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8R650|E8R650_ISOPI ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=truA PE=3 SV=1 ; EVALUE=6e-92 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R418|D2R418_PIRSD ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=truA PE=3 SV=1 ; EVALUE=1e-76 ;
Q/S_length_ratio=0.877"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0SNN9|F0SNN9_PLABD ;
ALN/Q_length_ratio=1.048 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Planctomyces brasiliensis (strain ATCC 49424
/ DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=truA
PE=3 SV=1 ; EVALUE=1e-76 ; Q/S_length_ratio=0.899"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6C4N8|A6C4N8_9PLAN ;
ALN/Q_length_ratio=1.060 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Planctomyces maris DSM 8797 GN=truA PE=3
SV=1 ; EVALUE=2e-74 ; Q/S_length_ratio=0.936"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K0AZK6|K0AZK6_CLOA9 ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Clostridium acidurici (strain ATCC 7906 /
DSM 604 / KCTC 5404 / 9a) GN=truA2 PE=3 SV=1 ;
EVALUE=7e-69 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R1CWP0|R1CWP0_9CLOT ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Clostridiaceae bacterium L21-TH-D2 GN=truA
PE=3 SV=1 ; EVALUE=1e-67 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A3ZQX0|A3ZQX0_9PLAN ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Blastopirellula marina DSM 3645 GN=truA PE=3
SV=1 ; EVALUE=2e-67 ; Q/S_length_ratio=0.962"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C7IUU4|C7IUU4_THEET ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Thermoanaerobacter ethanolicus CCSD1 GN=truA
PE=3 SV=1 ; EVALUE=4e-67 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_14 ; ACCESSION=B0KCN3 ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Thermoanaerobacter pseudethanolicus (strain
ATCC 33223 / 39E) GN=truA PE=3 SV=1 ; EVALUE=4e-67 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|E1SZF9|E1SZF9_THESX ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Thermoanaerobacter sp. (strain X513) GN=truA
PE=3 SV=1 ; EVALUE=4e-67 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E8UV17|E8UV17_THEBF ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Thermoanaerobacter brockii subsp. finnii
(strain ATCC 43586 / DSM 3389 / AKO-1) GN=truA PE=3 SV=1 ;
EVALUE=4e-67 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_13 ; ACCESSION=B0K5S6 ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Thermoanaerobacter sp. (strain X514) GN=truA
PE=3 SV=1 ; EVALUE=4e-67 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E1FFI5|E1FFI5_9THEO ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Thermoanaerobacter sp. X561 GN=truA PE=3
SV=1 ; EVALUE=4e-67 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D5XAB7|D5XAB7_THEPJ ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=tRNA pseudouridine
synthase A OS=Thermincola potens (strain JR) GN=truA PE=3
SV=1 ; EVALUE=5e-67 ; Q/S_length_ratio=1.016"
/note="Pfam_scan:hit_1 (6..105);
Pfam:PF01416.15:PseudoU_synth_1;
Pfam_type:Domain;HMM_aln_Length:97; HMM_Length:105;
EVALUE:3.2e-12; BITSCORE: 46.7"
/note="Pfam_scan:hit_2 (145..246);
Pfam:PF01416.15:PseudoU_synth_1;
Pfam_type:Domain;HMM_aln_Length:99; HMM_Length:105;
EVALUE:4e-15; BITSCORE: 56.1"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:5.4.99.12"
BEGIN
1 MRNLKLTIRY DGTDFFGWQT QPGQRTVQET IEKAIGEITR ESRVRVNCSG RTDSGVHAVG
61 QVANVYTASR LSCETLLKAI NSKLPDDVNV REVVEAPQSF CANKDAVRKS YRYVVQDGRQ
121 QDPFLRKYAW FVRQNLDAEV MARAGRCLVG RHDFRCFETE WPNRLTSVRT ITHLSVNRFG
181 ECIWIDVEAN GFLYNMVRAI AGSLVQVGRG FWPETQIADV LRAMDRRLAG PTAPPEGLFL
241 MRVTYHPCPT
//