LOCUS VTR91774.1 227 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna lyase : Endonuclease III OS=Pedosphaera
parvula (strain Ellin514) GN=Cflav_PD0258 PE=3 SV=1: HhH-
GPD protein.
ACCESSION LR593886-1075
PROTEIN_ID VTR91774.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_59400"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B9XRV4|B9XRV4_PEDPL ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Endonuclease III
OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0258
PE=3 SV=1 ; EVALUE=6e-97 ; Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A085EY95|A0A085EY95_9BURK ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Endonuclease III
OS=Massilia sp. LC238 GN=nth_2 PE=3 SV=1 ; EVALUE=2e-88 ;
Q/S_length_ratio=1.023"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W0RCA1|W0RCA1_9BACT ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Endonuclease III
OS=Gemmatimonadetes bacterium KBS708 GN=J421_0418 PE=3
SV=1 ; EVALUE=4e-88 ; Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|U2SNR2|U2SNR2_9DELT ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=Endonuclease III
OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_05985
PE=3 SV=1 ; EVALUE=3e-87 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L7UP60|L7UP60_MYXSD ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Endonuclease III
OS=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 /
Mx s8) GN=MYSTI_07027 PE=3 SV=1 ; EVALUE=8e-85 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|I4EDX8|I4EDX8_9CHLR ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Endonuclease III
OS=Nitrolancea hollandica Lb GN=NITHO_1650009 PE=3 SV=1 ;
EVALUE=5e-84 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|S9PCS1|S9PCS1_9DELT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Endonuclease III
OS=Cystobacter fuscus DSM 2262 GN=D187_001553 PE=3 SV=1 ;
EVALUE=5e-84 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|I2GCN8|I2GCN8_9BACT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Endonuclease III
OS=Fibrisoma limi BUZ 3 GN=BN8_00604 PE=3 SV=1 ;
EVALUE=5e-84 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I0K9Y4|I0K9Y4_9BACT ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=Endonuclease III
OS=Fibrella aestuarina BUZ 2 GN=FAES_2928 PE=3 SV=1 ;
EVALUE=9e-84 ; Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F8ELX7|F8ELX7_RUNSL ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Endonuclease III
OS=Runella slithyformis (strain ATCC 29530 / DSM 19594 /
LMG 11500 / NCIMB 11436 / LSU 4) GN=Runsl_3436 PE=3 SV=1 ;
EVALUE=3e-83 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M7N5B2|M7N5B2_9BACT ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Endonuclease III
OS=Cesiribacter andamanensis AMV16 GN=nth_1 PE=3 SV=1 ;
EVALUE=1e-82 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A068NL22|A0A068NL22_9BACT ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=Endonuclease III
OS=Fimbriimonas ginsengisoli Gsoil 348 GN=OP10G_0739 PE=3
SV=1 ; EVALUE=1e-82 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|B4WJI4|B4WJI4_9SYNE ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Endonuclease III
OS=Synechococcus sp. PCC 7335 GN=S7335_2982 PE=3 SV=1 ;
EVALUE=1e-82 ; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D1C351|D1C351_SPHTD ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Endonuclease III
OS=Sphaerobacter thermophilus (strain DSM 20745 / S 6022)
GN=Sthe_1233 PE=3 SV=1 ; EVALUE=2e-82 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|H8MFT7|H8MFT7_CORCM ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Endonuclease III
OS=Corallococcus coralloides (strain ATCC 25202 / DSM 2259
/ NBRC 100086 / M2) GN=nth1a PE=3 SV=1 ; EVALUE=6e-81 ;
Q/S_length_ratio=0.894"
/note="Pfam_scan:hit_1 (49..184); Pfam:PF00730.20:HhH-GPD;
Pfam_type:Domain;HMM_aln_Length:106; HMM_Length:108;
EVALUE:4.7e-16; BITSCORE: 59.0"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0016829"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0006950"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:4.2.99.18"
BEGIN
1 MPAAKHFKKK PFDIEEAIPL LREAVAPYPK AALFELAGEG HTSVFEILVA CIISIRTRDE
61 TTLPVSRRLF AAAPRPADVA ALSVKEIERL IYPSTFHDVK AGTIRTVARE TVEKYDGVLP
121 CDADELMKFK GVGPKCANLA VGITCGQMLT GVDIHVHRVT NRWGYVSAKT PEKTMDELHE
181 KLPQHLRVEI NALLVPFGKH ICTGARPKCS SCPLLEMCQQ VGVTRHE
//