LOCUS VTR91687.1 317 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase-recombinase protein : Uncultured
bacterium genome assembly Metasoil_fosmids_resub OS=uncultured
bacterium PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-988
PROTEIN_ID VTR91687.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_60270"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KMF3|A0A090KMF3_9BACT ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-58 ;
Q/S_length_ratio=0.510"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|X0ZHI7|X0ZHI7_9ZZZZ ;
ALN/Q_length_ratio=0.644 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H4_L00480 OS=marine sediment
metagenome GN=S01H4_14198 PE=4 SV=1 ; EVALUE=6e-53 ;
Q/S_length_ratio=1.132"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5R6X7|M5R6X7_9PLAN ;
ALN/Q_length_ratio=0.826 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_07826 PE=4 SV=1 ; EVALUE=7e-45 ;
Q/S_length_ratio=0.597"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5TZQ5|M5TZQ5_9PLAN ;
ALN/Q_length_ratio=0.722 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_03803 PE=4 SV=1
; EVALUE=9e-44 ; Q/S_length_ratio=0.616"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TSZ5|M5TSZ5_9PLAN ;
ALN/Q_length_ratio=0.631 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_06380 PE=4 SV=1
; EVALUE=3e-43 ; Q/S_length_ratio=0.598"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CAI7|L7CAI7_RHOBT ;
ALN/Q_length_ratio=0.754 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_05106 PE=4 SV=1 ;
EVALUE=3e-42 ; Q/S_length_ratio=0.559"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q7UJ13|Q7UJ13_RHOBA ;
ALN/Q_length_ratio=0.628 ; DESCRIPTION=Probable
integrase-recombinase protein OS=Rhodopirellula baltica
(strain SH1) GN=RB12202 PE=4 SV=1 ; EVALUE=5e-40 ;
Q/S_length_ratio=0.586"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M2AG18|M2AG18_9PLAN ;
ALN/Q_length_ratio=0.644 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein (Fragment)
OS=Rhodopirellula europaea 6C GN=RE6C_03211 PE=4 SV=1 ;
EVALUE=1e-38 ; Q/S_length_ratio=0.751"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5U9Y1|M5U9Y1_9PLAN ;
ALN/Q_length_ratio=0.637 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_00409 PE=4 SV=1
; EVALUE=3e-38 ; Q/S_length_ratio=0.581"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2AQ41|M2AQ41_9PLAN ;
ALN/Q_length_ratio=0.505 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Rhodopirellula europaea 6C GN=RE6C_04415 PE=4 SV=1 ;
EVALUE=6e-23 ; Q/S_length_ratio=1.403"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|X0T3K4|X0T3K4_9ZZZZ ;
ALN/Q_length_ratio=0.350 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L08131 (Fragment) OS=marine
sediment metagenome GN=S01H1_18596 PE=4 SV=1 ;
EVALUE=2e-22 ; Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|X0SNN7|X0SNN7_9ZZZZ ;
ALN/Q_length_ratio=0.524 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L00378 OS=marine sediment
metagenome GN=S01H1_04139 PE=4 SV=1 ; EVALUE=1e-18 ;
Q/S_length_ratio=1.124"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L0DJ84|L0DJ84_SINAD ;
ALN/Q_length_ratio=0.514 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4560
PE=4 SV=1 ; EVALUE=2e-17 ; Q/S_length_ratio=0.819"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B5JL57|B5JL57_9BACT ;
ALN/Q_length_ratio=0.505 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_705 PE=4
SV=1 ; EVALUE=1e-11 ; Q/S_length_ratio=0.741"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5SU81|M5SU81_9PLAN ;
ALN/Q_length_ratio=0.577 ; DESCRIPTION=Tyrosine
recombinase XerD OS=Rhodopirellula sp. SWK7 GN=RRSWK_06961
PE=4 SV=1 ; EVALUE=8e-10 ; Q/S_length_ratio=0.691"
/note="Pfam_scan:hit_1 (27..209);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:151; HMM_Length:173;
EVALUE:1.2e-17; BITSCORE: 64.1"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MLNVARTRPL DSKLAINRGG RKGQAGARLT DATRAALIRA GCERALVYKT LVLTGLRKSE
61 LESITVGQVR LDDRPHIALA AADEKARRGA LVPLRTDLAD DLRNWLAERL DEVQSKARLA
121 GQSIPPALPS DTLLFCVLLH LIRNLKKDLT AAGIPVRDDQ GFVIDPHSMR HTLATMLAKG
181 GAAPRITQEL MRHSDPRLTA NVYTHLGLSD TRSALDSLPS LSGSVFAGAG PLAPQLALTP
241 YKRGQNGPPS DKLAESEGVR PIPNGLDAKP GNVNENSPPT TAVISGPSQI KLTQEVAAVG
301 FEPTTSRLLH LNKLLKK
//