LOCUS VTR91668.1 329 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase : Site-specific recombinase
XerD OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7675 PE=4 SV=
1: Phage_int_SAM_1: Phage_integrase protein.
ACCESSION LR593886-969
PROTEIN_ID VTR91668.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_60460"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DQH8|L0DQH8_SINAD ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7675
PE=4 SV=1 ; EVALUE=1e-121 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DQC3|L0DQC3_SINAD ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7582
PE=4 SV=1 ; EVALUE=1e-120 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A0A5B286|A0A0A5B286_9BURK ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Phage integrase
family protein OS=Burkholderia sp. MSHR4009 GN=X984_6134
PE=4 SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A0A3P7Q0|A0A0A3P7Q0_BURPE ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Phage integrase
family protein OS=Burkholderia pseudomallei MSHR4868
GN=X990_6008 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A0A5BES4|A0A0A5BES4_9BURK ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Phage integrase
family protein OS=Burkholderia sp. MSHR4018 GN=X986_6138
PE=4 SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|W5YE02|W5YE02_KOMXY ;
ALN/Q_length_ratio=0.933 ;
DESCRIPTION=Integrase/recombinase XerD, putative
OS=Gluconacetobacter xylinus E25 GN=H845_3263 PE=4 SV=1 ;
EVALUE=1e-112 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F3INQ4|F3INQ4_PSESL ;
ALN/Q_length_ratio=0.936 ;
DESCRIPTION=Integrase/recombinase XerD, putative
OS=Pseudomonas syringae pv. lachrymans str. M302278
GN=PLA106_21973 PE=4 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A010S056|A0A010S056_PSEFL ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Integrase
OS=Pseudomonas fluorescens HK44 GN=HK44_002080 PE=4 SV=1 ;
EVALUE=1e-111 ; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D4Z8P7|D4Z8P7_SPHJU ;
ALN/Q_length_ratio=0.939 ;
DESCRIPTION=Invertase/recombinase like protein
OS=Sphingobium japonicum (strain NBRC 101211 / UT26S)
GN=SJA_P1-00270 PE=4 SV=1 ; EVALUE=1e-111 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q5NWK4|Q5NWK4_AROAE ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=Putative site
specific integrase OS=Aromatoleum aromaticum (strain EbN1)
GN=int PE=4 SV=1 ; EVALUE=1e-110 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A0A6CXE0|A0A0A6CXE0_9SPHN ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=Integrase
OS=Sphingomonas sp. Ant20 GN=NI18_19805 PE=4 SV=1 ;
EVALUE=1e-110 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I5BJ02|I5BJ02_9SPHN ;
ALN/Q_length_ratio=0.939 ;
DESCRIPTION=Invertase/recombinase like protein
OS=Sphingobium indicum B90A GN=SIDU_00269 PE=4 SV=1 ;
EVALUE=1e-109 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A081R933|A0A081R933_SPHCR ;
ALN/Q_length_ratio=0.939 ;
DESCRIPTION=Invertase/recombinase like protein
OS=Sphingobium chlorophenolicum GN=BV95_04040 PE=4 SV=1 ;
EVALUE=1e-109 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A038H1Z5|A0A038H1Z5_9BURK ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Integrase
OS=Burkholderia sp. MP-1 GN=BG58_30650 PE=4 SV=1 ;
EVALUE=1e-109 ; Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q888E2|Q888E2_PSESM ;
ALN/Q_length_ratio=0.891 ;
DESCRIPTION=Integrase/recombinase XerD, putative
OS=Pseudomonas syringae pv. tomato (strain DC3000)
GN=PSPTO_1084 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.111"
/note="Pfam_scan:hit_1 (38..115);
Pfam:PF02899.12:Phage_int_SAM_1;
Pfam_type:Domain;HMM_aln_Length:77; HMM_Length:84;
EVALUE:1.8e-10; BITSCORE: 40.8"
/note="Pfam_scan:hit_2 (140..318);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:167; HMM_Length:173;
EVALUE:1e-19; BITSCORE: 70.8"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MTGVPFIEGR GASRPDHPAV PGTAVPALFA GAGDRGAWRY IEFLTAEIRN PNTRAAYAHA
61 LRRFSDWCQC HQLRLEKLTP VHVATYVEHL GRVLAKPSVK QHLAAIRMLG DYLVLGQVIP
121 SNPASSVRGP KYVVKTGKTP VLTREEAREL LDGIGGARVA DLRDRALIGL MVYSFARVSA
181 VLGMDVGDYY QQGKRWWVRL HEKGGKEHAV PCHHKADEYL DAYLTGAGLS AEKNGPLFRR
241 LNRDGTLGTT RLDRREALAM IKRRAGAAAL GTGIGCHSFR ATGITAYLHN GGTLETAMAI
301 AAHESPRTTK LYDRTRDGLT LEEIERIRL
//