LOCUS VTR91631.1 775 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1:
HAMP: PAS_9: MCPsignal protein.
ACCESSION LR593886-932
PROTEIN_ID VTR91631.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_60830"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.668 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.595 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-148 ; Q/S_length_ratio=1.296"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.585 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-146 ;
Q/S_length_ratio=1.490"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F4AI75|F4AI75_GLAS4 ;
ALN/Q_length_ratio=0.573 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Glaciecola sp. (strain 4H-3-7+YE-5) GN=Glaag_2576 PE=4
SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K6X5F6|K6X5F6_9ALTE ;
ALN/Q_length_ratio=0.573 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Glaciecola agarilytica NO2 GN=mcp
PE=4 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D7HGU4|D7HGU4_VIBCL ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae RC385
GN=VCRC385_00092 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=1.339"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Y0KHL8|Y0KHL8_9PROT ;
ALN/Q_length_ratio=0.608 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylophilaceae bacterium 11 GN=Meth11DRAFT_1510 PE=4
SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=0.897"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.605 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=0.852"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G0A6T8|G0A6T8_METMM ;
ALN/Q_length_ratio=0.592 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylomonas methanica (strain MC09) GN=Metme_2154 PE=4
SV=1 ; EVALUE=1e-140 ; Q/S_length_ratio=1.059"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K5N429|K5N429_VIBCL ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-61A2 GN=VCHC61A2_0041 PE=4 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=1.224"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K5MIT2|K5MIT2_VIBCL ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-60A1 GN=VCHC60A1_0116 PE=4 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=1.224"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K2VMY6|K2VMY6_VIBCL ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Aerotaxis
transducer Aer2 domain protein OS=Vibrio cholerae HC-55A1
GN=aer2 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.224"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085PQ25|A0A085PQ25_VIBCL ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DN41_2401 PE=4 SV=1 ; EVALUE=1e-139
; Q/S_length_ratio=1.176"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5KY81|K5KY81_VIBCL ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-1A2 GN=VCHC1A2_0123 PE=4 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=1.224"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D0I1E3|D0I1E3_VIBCL ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae CT 5369-93
GN=VIH_002620 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.176"
/note="Pfam_scan:hit_1 (11..193);
Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:179; HMM_Length:181;
EVALUE:5.9e-25; BITSCORE: 87.6"
/note="Pfam_scan:hit_2 (200..269); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:70;
EVALUE:1.4e-11; BITSCORE: 44.3"
/note="Pfam_scan:hit_3 (301..405); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:101; HMM_Length:104;
EVALUE:1.1e-13; BITSCORE: 51.3"
/note="Pfam_scan:hit_4 (519..720);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:3.5e-64; BITSCORE: 216.2"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MPNQLVEKFN NLGIGTRLIG GFLVLAVACA AVGFWGLRSM TQINASLENA NGNLLPSVRA
61 LTDLRGNLST VQRAERSILM ATRRKNEAVK NQATGAQETA MVKAREAVKR YEALPMIDKE
121 KKLWAEFLPS MEAFFRDHEA TMGALKGGDL ERAEQLCFDS VPNALKMNTQ LNELCDLQGQ
181 IGEGDAKDAR ELYASARTSM FVVIGGAAVL AVGLGIFFRS LIVNPLTTTV KVLQAVAAGD
241 LTQKATVTAT DEFGQMGSAL NATVQGIHTA LQQDKVNWEA VGKQRAENAD FAGQIVAIGR
301 AQAVIEFKLD GTAVSANENF QRTMGYTVPE VQGRHHSMFV EPAFASSSEY RDLWSRLNRG
361 EPVIGDFKRV GKGGKEVWLQ ASYNPILDLN GKPYKVVKFA TDITATKHME QQVKEDAAEL
421 KEKVAAIMTA VSALAAGDFT QQAPDLGDDQ VGQMAAALNK AVVSVRTALE GVREVSEQLA
481 DASGQLSAAS DEISTGAQEQ ASSLEETAST LEEITATVRQ NSDSAQQARQ LASSSKEVAE
541 KGGQVVGHAV DAMSEINQSS KKIADIITTI DEIAFQTNLL ALNAAVEAAR AGEQGRGFAV
601 VASEVRNLAQ RSATAAKEIK SLIEDSVKKV DAGTELVNQS GSTLGEIVTS VKRVTDIITE
661 IAAAGKEQST GIEQVNKAVN QMDAVTQKNA SQTEEMSATA QTLTDQAAQL RDLVARFKLS
721 ESGRTVPRPA PRSKIPATKP RPAVVKALKS GRSSGNGHSH ELDRLGGESD GFTEF
//