LOCUS VTR91544.1 331 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana gdp-mannose -dehydratase : GDP-mannose
4,6-dehydratase OS=Sphaerobacter thermophilus (strain
DSM 20745 / S 6022) GN=gmd PE=3 SV=1: Epimerase protein.
ACCESSION LR593886-845
PROTEIN_ID VTR91544.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_61700"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D1C920|D1C920_SPHTD ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Sphaerobacter thermophilus (strain DSM
20745 / S 6022) GN=gmd PE=3 SV=1 ; EVALUE=1e-175 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I4EKQ3|I4EKQ3_9CHLR ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Nitrolancea hollandica Lb GN=gmd PE=3
SV=1 ; EVALUE=1e-174 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E3FCX5|E3FCX5_STIAD ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Stigmatella aurantiaca (strain DW4/3-1)
GN=gmd PE=3 SV=1 ; EVALUE=1e-173 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q1D1J6|Q1D1J6_MYXXD ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Myxococcus xanthus (strain DK 1622)
GN=gmd PE=3 SV=1 ; EVALUE=1e-171 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L7UE19|L7UE19_MYXSD ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Myxococcus stipitatus (strain DSM 14675
/ JCM 12634 / Mx s8) GN=gmd PE=3 SV=1 ; EVALUE=1e-171 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|U2TZG0|U2TZG0_9DELT ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Myxococcus sp. (contaminant ex DSM 436)
GN=gmd PE=3 SV=1 ; EVALUE=1e-170 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F8CHU1|F8CHU1_MYXFH ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Myxococcus fulvus (strain ATCC BAA-855
/ HW-1) GN=gmd PE=3 SV=1 ; EVALUE=1e-170 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E6Q6X2|E6Q6X2_9ZZZZ ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-D-mannose
dehydratase, NAD(P)-binding OS=mine drainage metagenome
GN=gmd PE=3 SV=1 ; EVALUE=1e-169 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|T0MIV1|T0MIV1_9BACT ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=candidate division ZIXI bacterium RBG-1
GN=gmd PE=3 SV=1 ; EVALUE=1e-169 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|H8MLP4|H8MLP4_CORCM ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Corallococcus coralloides (strain ATCC
25202 / DSM 2259 / NBRC 100086 / M2) GN=gmd PE=3 SV=1 ;
EVALUE=1e-167 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q08T30|Q08T30_STIAD ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Stigmatella aurantiaca (strain DW4/3-1)
GN=STIAU_7609 PE=3 SV=1 ; EVALUE=1e-167 ;
Q/S_length_ratio=0.424"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S9SQ79|S9SQ79_PAEAL ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Paenibacillus alvei TS-15 GN=gmd PE=3
SV=1 ; EVALUE=1e-166 ; Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B9L551|B9L551_THERP ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Thermomicrobium roseum (strain ATCC
27502 / DSM 5159 / P-2) GN=gmd PE=3 SV=1 ; EVALUE=1e-165 ;
Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q0W7G0|Q0W7G0_UNCMA ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Uncultured methanogenic archaeon RC-I
GN=gmd PE=3 SV=1 ; EVALUE=1e-165 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A7NNX7|A7NNX7_ROSCS ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=GDP-mannose
4,6-dehydratase OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=gmd PE=3 SV=1 ; EVALUE=1e-165 ;
Q/S_length_ratio=1.031"
/note="Pfam_scan:hit_1 (4..243);
Pfam:PF01370.16:Epimerase;
Pfam_type:Family;HMM_aln_Length:235; HMM_Length:236;
EVALUE:1.1e-61; BITSCORE: 208.2"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0005975"
/note="GO_domain:GO:0016829"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="Enzyme_Code:EC:4.2.1.47"
BEGIN
1 MKRALITGIT GQDGSYLAEL LLEKGYEVHG IVRRASTESF ERIEHLAGKI HLHQADLLDQ
61 LSLIDVIKEA NPQEVYNLAA QSFVPTSWKQ PVLTGEFTAI GVTRMLEAIK LLGRDTIKFY
121 QASSSEMFGK VQAVPQIETT PFYPRSPYGV AKVYGHWITV NYRESFNMFC TSGILFNHES
181 ERRGKEFVTR KVTDGVARIK LGLATELRLG NLDSKRDWGF AGDYVRAMWL MLQQDKPDDF
241 VVATNKTHTV QRLVEVAFEA AGLDWKKYVK IDQSLVRPAE VDLLIGDPAK AKKHLGWEPE
301 VSFEQLIERM VKADLARLQG QPVPDFKARG I
//