LOCUS VTR91526.1 411 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna-directed dna polymerase : DNA-directed
DNA polymerase OS=Meiothermus ruber (strain ATCC 35948
/ DSM 1279 / VKM B-1258 / 21) GN=Mrub_3025 PE=4 SV=1:
IMS: IMS_HHH: IMS_C protein.
ACCESSION LR593886-827
PROTEIN_ID VTR91526.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_61880"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M9XCV6|M9XCV6_MEIRD ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Meiothermus ruber (strain ATCC 35948 / DSM
1279 / VKM B-1258 / 21) GN=K649_07380 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D3PQD6|D3PQD6_MEIRD ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Meiothermus ruber (strain ATCC 35948 / DSM
1279 / VKM B-1258 / 21) GN=Mrub_3025 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|I6YTV1|I6YTV1_MELRP ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Melioribacter roseus (strain JCM 17771 /
P3M-2) GN=MROS_0694 PE=4 SV=1 ; EVALUE=1e-129 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D7BHZ1|D7BHZ1_MEISD ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Meiothermus silvanus (strain ATCC 700542 /
DSM 9946 / VI-R2) GN=Mesil_0324 PE=4 SV=1 ; EVALUE=1e-128
; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F0SGM2|F0SGM2_PLABD ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Planctomyces brasiliensis (strain ATCC 49424
/ DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_4050 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|E6PLQ2|E6PLQ2_9ZZZZ ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Putative
DNA-directed DNA polymerase OS=mine drainage metagenome
GN=CARN2_2124 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E4UAC7|E4UAC7_OCEP5 ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Oceanithermus profundus (strain DSM 14977 /
NBRC 100410 / VKM B-2274 / 506) GN=Ocepr_2183 PE=4 SV=1 ;
EVALUE=1e-109 ; Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|C1F7T1|C1F7T1_ACIC5 ;
ALN/Q_length_ratio=1.019 ; DESCRIPTION=ImpB/MucB/SamB
family protein OS=Acidobacterium capsulatum (strain ATCC
51196 / DSM 11244 / JCM 7670) GN=ACP_1813 PE=4 SV=1 ;
EVALUE=1e-105 ; Q/S_length_ratio=0.932"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5ELD3|D5ELD3_CORAD ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Coraliomargarita akajimensis (strain DSM
45221 / IAM 15411 / JCM 23193 / KCTC 12865) GN=Caka_2051
PE=4 SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A068NSH1|A0A068NSH1_9BACT ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Fimbriimonas ginsengisoli Gsoil 348
GN=OP10G_2934 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I3ZBE4|I3ZBE4_TERRK ;
ALN/Q_length_ratio=1.022 ;
DESCRIPTION=Nucleotidyltransferase/DNA polymerase involved
in DNA repair OS=Terriglobus roseus (strain DSM 18391 /
NRRL B-41598 / KBS 63) GN=Terro_0212 PE=4 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=0.913"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C6WX69|C6WX69_METML ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Methylotenera mobilis (strain JLW8 / ATCC
BAA-1282 / DSM 17540) GN=Mmol_1614 PE=4 SV=1 ;
EVALUE=1e-99 ; Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A023NYD8|A0A023NYD8_9GAMM ;
ALN/Q_length_ratio=0.998 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Dyella jiangningensis GN=CH75_22735 PE=4
SV=1 ; EVALUE=5e-99 ; Q/S_length_ratio=0.899"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|E8WWP9|E8WWP9_GRATM ;
ALN/Q_length_ratio=1.019 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Granulicella tundricola (strain ATCC
BAA-1859 / DSM 23138 / MP5ACTX9) GN=AciX9_0305 PE=4 SV=1 ;
EVALUE=6e-99 ; Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E8V1C6|E8V1C6_TERSS ;
ALN/Q_length_ratio=1.024 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Terriglobus saanensis (strain ATCC BAA-1853
/ DSM 23119 / SP1PR4) GN=AciPR4_3792 PE=4 SV=1 ;
EVALUE=7e-98 ; Q/S_length_ratio=0.919"
/note="Pfam_scan:hit_1 (8..157); Pfam:PF00817.15:IMS;
Pfam_type:Family;HMM_aln_Length:148; HMM_Length:149;
EVALUE:2.7e-34; BITSCORE: 118.0"
/note="Pfam_scan:hit_2 (169..200); Pfam:PF11798.3:IMS_HHH;
Pfam_type:Motif;HMM_aln_Length:30; HMM_Length:32;
EVALUE:2.1e-06; BITSCORE: 27.4"
/note="Pfam_scan:hit_3 (233..357); Pfam:PF11799.3:IMS_C;
Pfam_type:Domain;HMM_aln_Length:114; HMM_Length:127;
EVALUE:5.3e-09; BITSCORE: 36.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0006950"
BEGIN
1 MPLRHLFIDM NSFFASVEQQ YDHKLRYRAV AVIPTKAETT SCIAASYEAK ARGVKTGTPV
61 WEARILCPEI VFVTGDHRRY VTMHNRILAA VRSVIPIEKV VSIDEMSCRL TSAEREPEKI
121 AILAQKIKSA IRALAGDYMA CSIGAGPNTL LAKVAADMEK PDGLTVLADA DLPHKLHKLR
181 LNDFPGIGPR MERRLERHGI FTAAQFCAAP AQALAKVWGS KVHGERWYRL LRGEEVADTP
241 TRRQTVSHSH VLPPELRTDA GAYGVLVRLV HKAAARLRKI NYWAGSISVG VRFLGADRGD
301 SVRWEESVHV PRCRDTQAFV AAAAKMWEHR PRGRTPFKVS MVLSELVPSR SATPSLFDDD
361 HQAEDLSHAM DDVNAEFGAS VVYLGSMFGM RDAAPSRVAF TQIPDFDRRV N
//