LOCUS VTR91515.1 308 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana fis family transcriptional regulator
: Sigma54 specific transcriptional regulator, Fis family
OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_1061
PE=4 SV=1: Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-816
PROTEIN_ID VTR91515.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_61990"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A7H973|A7H973_ANADF ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=Anae109_1061 PE=4 SV=1 ;
EVALUE=1e-104 ; Q/S_length_ratio=0.512"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5UAF9|M5UAF9_9PLAN ;
ALN/Q_length_ratio=1.029 ; DESCRIPTION=Transcriptional
regulator, NifA subfamily, Fis Family OS=Rhodopirellula
sallentina SM41 GN=RSSM_00144 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.417"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6EHC4|A6EHC4_9SPHI ;
ALN/Q_length_ratio=1.013 ; DESCRIPTION=Sigma-54-dependent
transcriptional regulator OS=Pedobacter sp. BAL39
GN=PBAL39_17026 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.560"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W4LK71|W4LK71_9DELT ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_19060 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.604"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1IK50|Q1IK50_KORVE ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-binding protein
Fis OS=Koribacter versatilis (strain Ellin345)
GN=Acid345_3750 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.813"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G8TFQ1|G8TFQ1_NIAKG ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Niastella
koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
GN=Niako_3160 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.483"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|G8NQA1|G8NQA1_GRAMM ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=PAS modulated
sigma54 specific transcriptional regulator, Fis family
OS=Granulicella mallensis (strain ATCC BAA-1857 / DSM
23137 / MP5ACTX8) GN=AciX8_0607 PE=4 SV=1 ; EVALUE=1e-100
; Q/S_length_ratio=0.504"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A085ZG55|A0A085ZG55_9FLAO ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=Fis family
transcriptional regulator OS=Flavobacterium reichenbachii
GN=IW19_21255 PE=4 SV=1 ; EVALUE=5e-99 ;
Q/S_length_ratio=0.681"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W0RRR0|W0RRR0_9BACT ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Sigma-54 factor
interaction domain-containing protein OS=Gemmatimonadetes
bacterium KBS708 GN=J421_5475 PE=4 SV=1 ; EVALUE=3e-98 ;
Q/S_length_ratio=0.578"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A098WZS8|A0A098WZS8_9CYAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Fis family
transcriptional regulator OS=Tolypothrix bouteillei
VB521301 GN=DA73_000000118520 PE=4 SV=1 ; EVALUE=7e-98 ;
Q/S_length_ratio=0.421"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A1ZPF6|A1ZPF6_9BACT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Transcriptional
regulator, NifA subfamily, Fis Family OS=Microscilla
marina ATCC 23134 GN=M23134_03763 PE=4 SV=1 ; EVALUE=8e-98
; Q/S_length_ratio=0.629"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C7PGQ0|C7PGQ0_CHIPD ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Chitinophaga
pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM
2034) GN=Cpin_4307 PE=4 SV=1 ; EVALUE=2e-97 ;
Q/S_length_ratio=0.485"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D8PIC0|D8PIC0_9BACT ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-54 dependent
transcriptional regulator OS=Candidatus Nitrospira
defluvii GN=NIDE3319 PE=4 SV=1 ; EVALUE=4e-97 ;
Q/S_length_ratio=0.453"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A098X224|A0A098X224_9CYAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Fis family
transcriptional regulator OS=Tolypothrix bouteillei
VB521301 GN=DA73_97240 PE=4 SV=1 ; EVALUE=5e-97 ;
Q/S_length_ratio=0.477"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I4C691|I4C691_DESTA ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=PAS domain S-box
OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 /
DCB-1) GN=Desti_2399 PE=4 SV=1 ; EVALUE=6e-97 ;
Q/S_length_ratio=0.600"
/note="Pfam_scan:hit_1 (2..168);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:161; HMM_Length:168;
EVALUE:1.1e-64; BITSCORE: 216.9"
/note="Pfam_scan:hit_2 (256..299); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:37; HMM_Length:42;
EVALUE:3.1e-06; BITSCORE: 26.5"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MTALVGALAH VRRAVEQVAP TDATVLILGE TGTGKELVAR ALHEQSRRAR GAFVPVNGAA
61 LVPALVASEL FGHEPGAFTG AVKRRIGRFE QAHNGTLFLD EVGDLAADVQ VALLRVLQEG
121 IVERLGGGDA ISVSVRVVAA TNRDLAAEVR AGSFRADLFY RLNVFPITLP PLRERKTDIP
181 ALAAHFLAHF AERHRRPTTI ISARVLRTLD AHDWPGNVRE LQNVIERAVI VSDGAELVVD
241 PAWLATTSPV ETARTWAEQE KARILAALKA ADGRIYGPGG AAQRLGLKPT TLYGKMRKHG
301 LTRDGDDT
//