LOCUS VTR91458.1 456 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana fis family transcriptional regulator
: Response regulator with CheY-like receiver, AAA-type
ATPase, and DNA-binding domains OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_5293 PE=4 SV=1: PAS_4: Sigma54_activ_2: HTH_8
protein.
ACCESSION LR593886-759
PROTEIN_ID VTR91458.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_62560"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DKS0|L0DKS0_SINAD ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5293 PE=4 SV=1
; EVALUE=9e-48 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6C344|A6C344_9PLAN ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Transcriptional
regulator OS=Planctomyces maris DSM 8797 GN=PM8797T_10044
PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B2A1V9|B2A1V9_NATTJ ;
ALN/Q_length_ratio=1.018 ; DESCRIPTION=PAS modulated
sigma54 specific transcriptional regulator, Fis family
OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM
18059 / JW/NM-WN-LF) GN=Nther_2600 PE=4 SV=1 ;
EVALUE=2e-36 ; Q/S_length_ratio=0.779"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F6CNR7|F6CNR7_DESK7 ;
ALN/Q_length_ratio=0.721 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM
B-1805 / 17) GN=Desku_2572 PE=4 SV=1 ; EVALUE=3e-36 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I5B4N5|I5B4N5_9DELT ;
ALN/Q_length_ratio=0.732 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Desulfobacter postgatei 2ac9
GN=DespoDRAFT_02604 PE=4 SV=1 ; EVALUE=2e-35 ;
Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2R3E8|D2R3E8_PIRSD ;
ALN/Q_length_ratio=0.697 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_0491 PE=4 SV=1 ; EVALUE=5e-34 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R4KH14|R4KH14_9FIRM ;
ALN/Q_length_ratio=0.715 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Desulfotomaculum gibsoniae DSM 7213
GN=Desgi_1445 PE=4 SV=1 ; EVALUE=8e-34 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7UBC9|L7UBC9_MYXSD ;
ALN/Q_length_ratio=0.728 ; DESCRIPTION=Fis family
transcriptional regulator OS=Myxococcus stipitatus (strain
DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_03884 PE=4 SV=1 ;
EVALUE=1e-33 ; Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q3B361|Q3B361_PELLD ;
ALN/Q_length_ratio=0.669 ; DESCRIPTION=Putative
transcriptional regulator, Fis family OS=Pelodictyon
luteolum (strain DSM 273) GN=Plut_1361 PE=4 SV=1 ;
EVALUE=2e-33 ; Q/S_length_ratio=1.063"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F3ZYE9|F3ZYE9_MAHA5 ;
ALN/Q_length_ratio=0.708 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Mahella australiensis (strain DSM 15567 / CIP 107919 /
50-1 BON) GN=Mahau_1501 PE=4 SV=1 ; EVALUE=2e-33 ;
Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A8MJB2|A8MJB2_ALKOO ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Putative sigma54
specific transcriptional regulator OS=Alkaliphilus
oremlandii (strain OhILAs) GN=Clos_2362 PE=4 SV=1 ;
EVALUE=2e-33 ; Q/S_length_ratio=0.903"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|N6X5Y7|N6X5Y7_9ALTE ;
ALN/Q_length_ratio=0.669 ; DESCRIPTION=Response regulator
in two-component reguatory system (Ebp family) protein
OS=Marinobacter nanhaiticus D15-8W GN=J057_02345 PE=4 SV=1
; EVALUE=2e-33 ; Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q6VMT3|Q6VMT3_MYXXA ;
ALN/Q_length_ratio=0.697 ; DESCRIPTION=Mutant NtrC-like
activator (Fragment) OS=Myxococcus xanthus PE=4 SV=1 ;
EVALUE=3e-33 ; Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q1D552|Q1D552_MYXXD ;
ALN/Q_length_ratio=0.697 ; DESCRIPTION=Sigma-54 dependent
DNA-binding reponse regulator Nla6 OS=Myxococcus xanthus
(strain DK 1622) GN=nla6 PE=4 SV=1 ; EVALUE=4e-33 ;
Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q30VA4|Q30VA4_DESAG ;
ALN/Q_length_ratio=0.695 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfovibrio alaskensis (strain G20) GN=Dde_3599 PE=4
SV=1 ; EVALUE=6e-33 ; Q/S_length_ratio=0.993"
/note="Pfam_scan:hit_1 (25..121); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:93; HMM_Length:110;
EVALUE:3.5e-05; BITSCORE: 23.7"
/note="Pfam_scan:hit_2 (171..317);
Pfam:PF14532.1:Sigma54_activ_2;
Pfam_type:Domain;HMM_aln_Length:136; HMM_Length:138;
EVALUE:6.3e-19; BITSCORE: 68.3"
/note="Pfam_scan:hit_3 (401..442); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42;
EVALUE:1.5e-10; BITSCORE: 40.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSTPPSPSGK GRPANSSGFA WRAFFHQSET PVFVLGKSRR LRYANPAWEK LAGVKLAEAL
61 GMVCSQRRHS TPLASVLAPT PEALAGRPDR ARRPAPPGRN GPPWWDVTFV PLAGDGSPRE
121 APAKASEALF GFVGFIAVVG EPVPAAARKI PPSVAALRDR RATHFSPELL AGESLASARL
181 VAQTRLAAQI AAPVWIVGEA GSGKETVARV IHHTSAVRDR AFVAIDCVGL QPYLIESLLF
241 GHGGLSASDR IGTVYLKEPG ALPRDMQQRL ADHFTEPASA RLICGSDRTA QDAVASGRLV
301 PVFQTALSAF EARIPPLRER LDDIPRLATR LVNRAIDPAA LTVLRGYSWP ANLREFVEVL
361 HESTGEGRTG PILREHLPHE LRVKAGLMRS GPPKSLNLDA ILEAVEKRII QLALRKTNNH
421 QTEAAELLGV FRAKLGRRLD ALGIPVSPPP PKPRKE
//