LOCUS VTR91450.1 258 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pseudouridine synthase : Putative 23S
rRNA pseudouridine synthase OS=Blastopirellula marina
DSM 3645 GN=DSM3645_04715 PE=4 SV=1: PseudoU_synth_2 protein.
ACCESSION LR593886-751
PROTEIN_ID VTR91450.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_62640"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A4A1L7|A4A1L7_9PLAN ;
ALN/Q_length_ratio=0.888 ; DESCRIPTION=Putative 23S rRNA
pseudouridine synthase OS=Blastopirellula marina DSM 3645
GN=DSM3645_04715 PE=4 SV=1 ; EVALUE=2e-68 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R7R1|D2R7R1_PIRSD ;
ALN/Q_length_ratio=0.880 ; DESCRIPTION=Pseudouridine
synthase OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_2821 PE=4 SV=1 ; EVALUE=4e-63 ;
Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0SLI1|F0SLI1_PLABD ;
ALN/Q_length_ratio=0.857 ; DESCRIPTION=Pseudouridine
synthase OS=Planctomyces brasiliensis (strain ATCC 49424 /
DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0032 PE=3 SV=1 ; EVALUE=2e-58 ;
Q/S_length_ratio=0.872"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0D9M3|L0D9M3_SINAD ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Pseudouridine
synthase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1548
PE=3 SV=1 ; EVALUE=3e-58 ; Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E4RX09|E4RX09_LEAB4 ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Pseudouridine
synthase OS=Leadbetterella byssophila (strain DSM 17132 /
KACC 11308 / 4M15) GN=Lbys_2372 PE=3 SV=1 ; EVALUE=3e-55 ;
Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5SQT2|D5SQT2_PLAL2 ;
ALN/Q_length_ratio=0.872 ; DESCRIPTION=Pseudouridine
synthase OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2721 PE=3 SV=1 ;
EVALUE=6e-54 ; Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5EWD0|D5EWD0_PRER2 ;
ALN/Q_length_ratio=0.814 ; DESCRIPTION=Pseudouridine
synthase OS=Prevotella ruminicola (strain ATCC 19189 / JCM
8958 / 23) GN=PRU_0298 PE=3 SV=1 ; EVALUE=7e-53 ;
Q/S_length_ratio=1.157"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F0S4V3|F0S4V3_PEDSD ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=Pseudouridine
synthase OS=Pedobacter saltans (strain ATCC 51119 / DSM
12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643)
GN=Pedsa_3598 PE=3 SV=1 ; EVALUE=2e-52 ;
Q/S_length_ratio=1.098"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B5YAZ5|B5YAZ5_DICT6 ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=Pseudouridine
synthase OS=Dictyoglomus thermophilum (strain ATCC 35947 /
DSM 3960 / H-6-12) GN=DICTH_0081 PE=3 SV=1 ; EVALUE=4e-52
; Q/S_length_ratio=1.142"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A099XW87|A0A099XW87_9FLAO ;
ALN/Q_length_ratio=0.818 ; DESCRIPTION=tRNA pseudouridine
synthase C, group TruC1 OS=Polaribacter sp. Hel1_33_49
GN=PHEL49_2432 PE=4 SV=1 ; EVALUE=9e-52 ;
Q/S_length_ratio=1.132"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D5SR10|D5SR10_PLAL2 ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Pseudouridine
synthase OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_0631 PE=4 SV=1 ;
EVALUE=1e-51 ; Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A4AUW1|A4AUW1_MARSH ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Putative ribosomal
large subunit pseudouridine synthase OS=Maribacter sp.
(strain HTCC2170 / KCCM 42371) GN=FB2170_13121 PE=4 SV=1 ;
EVALUE=2e-51 ; Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B8DZ32|B8DZ32_DICTD ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=Pseudouridine
synthase OS=Dictyoglomus turgidum (strain Z-1310 / DSM
6724) GN=Dtur_0345 PE=3 SV=1 ; EVALUE=2e-51 ;
Q/S_length_ratio=1.142"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D0MHX3|D0MHX3_RHOM4 ;
ALN/Q_length_ratio=0.818 ; DESCRIPTION=Pseudouridine
synthase OS=Rhodothermus marinus (strain ATCC 43812 / DSM
4252 / R-10) GN=Rmar_1191 PE=3 SV=1 ; EVALUE=4e-51 ;
Q/S_length_ratio=1.066"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|R6W5V8|R6W5V8_9BACT ;
ALN/Q_length_ratio=0.818 ; DESCRIPTION=Pseudouridine
synthase OS=Prevotella sp. CAG:592 GN=BN725_00061 PE=3
SV=1 ; EVALUE=4e-51 ; Q/S_length_ratio=1.162"
/note="Pfam_scan:hit_1 (36..191);
Pfam:PF00849.17:PseudoU_synth_2;
Pfam_type:Family;HMM_aln_Length:162; HMM_Length:164;
EVALUE:1.1e-30; BITSCORE: 106.5"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:5.4.99.12"
BEGIN
1 MTEPNERSEQ SDEAVIGAGV GSSHPFAAHV LYEDHHLLIV NKPAPLLTQA PPGVPNLEEV
61 VKSYIKEKYA KPAGVYLGVP HRLDRPVSGV VCFARNTKAA QRVHAQFAER SVRKVYWALV
121 EGVVDSDAGA WDDWIRKIAD EARVERAEAE APGAKLATLE YRVLQRLDSV THIELEPLTG
181 RMHQLRVQTA WRGHPVLGDT MYGGTRAFGP AAELPRDHVV ALHARRLTIT HPFTKQELTV
241 EAPLPAYWSP LLGASLAQ
//